RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 CTXN3Q4LDR2 81 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 SGO2Q562F6 1265 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 CRYBG2Q8N1P7 616 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 UBR7Q8N806 425 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 TRIM44Q96DX7 344 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 GPR88Q9GZN0 384 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 CEP83Q9Y592 693 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 A0A1W2PPC1 479 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 LCHNA4D1U4 455 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 CYP11B1P15538 503 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 TKTP29401 623 aaKnown RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 RAD23BP54727 409 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 MEA1Q16626 185 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 IRF2BP2Q7Z5L9 587 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 TMEM173Q86WV6 379 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 LRRC8AQ8IWT6 810 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 VPS52Q8N1B4 723 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 KLHL23Q8NBE8 558 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 SYT15Q9BQS2 421 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 HERC2P3Q9BVR0 1158 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 MRPL17Q9NRX2 175 aaKnown RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 ANK1P16157 1881 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 SSU72P8A0A1W2PR75 194 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 THAP12O43422 761 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 PNMA6AP0CW24 399 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 PTPN1P18031 435 aaKnown RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 TNFAIP3P21580 790 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 IGFBP6P24592 240 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 ZNF132P52740 706 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 SMAD3P84022 425 aaKnown RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 FAM109BQ6ICB4 259 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 ACOT1Q86TX2 421 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 B3GALNT2Q8NCR0 500 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 RIN2Q8WYP3 895 aaPredicted RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 PIK3R5Q8WYR1 880 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 PBX4Q9BYU1 374 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 LUC7LQ9NQ29 371 aaKnown RBP9.73□□□□□ -0.85
PTPN20-201ENST00000374218 CHST7Q9NS84 486 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 HESX1Q9UBX0 185 aa9.73□□□□□ -0.85
PTPN20-201ENST00000374218 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 C5orf67F2Z3F1 127 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 AKR1B10O60218 316 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 CYLC1P35663 651 aaPredicted RBP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 ERVK-21P61565 698 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 GOLGA8FQ08AF8 430 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 GOLGA8DPQ0D2H9 430 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 PPP1R2P3Q6NXS1 205 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 TRIM72Q6ZMU5 477 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 C4orf50Q6ZRC1 276 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 TMC7Q7Z402 723 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 SLC47A2Q86VL8 602 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 CCDC170Q8IYT3 715 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 SLC4A11Q8NBS3 891 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 ELOVL4Q9GZR5 314 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 HAUS4Q9H6D7 363 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 SEPT11Q9NVA2 429 aaKnown RBP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 BACE2Q9Y5Z0 518 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 COL4A6Q14031 1691 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 MYOGP15173 224 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 LMO2P25791 158 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 CDR2Q01850 454 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 DSG1Q02413 1049 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 MRPL58Q14197 206 aaKnown RBP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 PSMD5Q16401 504 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 PDE12Q6L8Q7 609 aaKnown RBP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 EPS8L1Q8TE68 723 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 BCL7CQ8WUZ0 217 aaPredicted RBP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 ZNF606Q8WXB4 792 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
PTPN20-201ENST00000374218 NGRNQ9NPE2 291 aaKnown RBP9.72□□□□□ -0.85
PTPN20-201ENST00000374218 SKILP12757 684 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.85
PTPN20-201ENST00000374218 CA8P35219 290 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 SNX16P57768 344 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 TAP1Q03518 808 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 SPA17Q15506 151 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 CNGA2Q16280 664 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 INTS6LQ5JSJ4 861 aaKnown RBP9.71□□□□□ -0.85
PTPN20-201ENST00000374218 RTP2Q5QGT7 225 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 OSTM1Q86WC4 334 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 RNF168Q8IYW5 571 aaPredicted RBP9.71□□□□□ -0.85
PTPN20-201ENST00000374218 MYCBPAPQ8TBZ2 947 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 MICAL1Q8TDZ2 1067 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 TIFAQ96CG3 184 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 CYFIP2Q96F07 1278 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 NOX5Q96PH1 765 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 C17orf80Q9BSJ5 609 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 MED10Q9BTT4 135 aa9.71□□□□□ -0.85
PTPN20-201ENST00000374218 NHEJ1Q9H9Q4 299 aaPredicted RBP9.71□□□□□ -0.85
PTPN20-201ENST00000374218 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms