RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
PRPF4-202ENST00000374199 ACAP1Q15027 740 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 LRIG3Q6UXM1 1119 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 SYDE1Q6ZW31 735 aaPredicted RBP13.33□□□□□ -0.28
PRPF4-202ENST00000374199 ARCQ7LC44 396 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 RHOT1Q8IXI2 618 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 ARFGAP1Q8N6T3 406 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 C17orf102A2RUQ5 167 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 MYO1FO00160 1098 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 P4HA1P13674 534 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 LRPAP1P30533 357 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 UAP1Q16222 522 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-202ENST00000374199 MAP3K21Q5TCX8 1036 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 ARHGAP17Q68EM7 881 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 UNC93AQ86WB7 457 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 JAMLQ86YT9 394 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 EPB41L4BQ9H329 900 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 GOLGA6L10A0A0M3HER8 536 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 IVDP26440 423 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 COILP38432 576 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-202ENST00000374199 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 OSTNP61366 133 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 RPL7AP62424 266 aaKnown RBP13.32□□□□□ -0.28
PRPF4-202ENST00000374199 DR1Q01658 176 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 PIGHQ14442 188 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-202ENST00000374199 STILQ15468 1287 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 PTPROQ16827 1216 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 SEL1L2Q5TEA6 688 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 KLHL7Q8IXQ5 586 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-202ENST00000374199 STK32AQ8WU08 396 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-202ENST00000374199 PTPRDP23468 1912 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 PODXLO00592 558 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 INPPL1O15357 1258 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 GNAT1P11488 350 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 C9orf57Q5W0N0 161 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 RHBDF2Q6PJF5 856 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 PASD1Q8IV76 773 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
PRPF4-202ENST00000374199 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 DPYSL4O14531 572 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 MICAL2O94851 1124 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 ENDOD1O94919 500 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 SCNN1AP37088 669 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 MRPS25P82663 173 aaKnown RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 FAM26DQ5JW98 314 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 CYP4V2Q6ZWL3 525 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 KBTBD7Q8WVZ9 684 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 DNAJB3Q8WWF6 145 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 ART4Q93070 314 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 C18orf8Q96DM3 657 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 PPP1R10Q96QC0 940 aaKnown RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 ZIC5Q96T25 663 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 OSMRQ99650 979 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 C11orf84Q9BUA3 381 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 CYLDQ9NQC7 956 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 KIF3CO14782 793 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 TLR3O15455 904 aaKnown RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 SPOPO43791 374 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 ERBB2P04626 1255 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 DNA2P51530 1060 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRPF4-202ENST00000374199 CRYBG2Q8N1P7 616 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 SLC4A5Q9BY07 1137 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 AP5M1Q9H0R1 490 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 SNTG2Q9NY99 539 aa13.31□□□□□ -0.28
PRPF4-202ENST00000374199 TNPO2O14787 897 aaKnown RBP13.3□□□□□ -0.28
PRPF4-202ENST00000374199 SEPT4O43236 478 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 CD58P19256 250 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 FGFR4P22455 802 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 GGCXP38435 758 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 ARSEP51690 589 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 CDH8P55286 799 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 FCGRTP55899 365 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 PTK6Q13882 451 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 VSIG1Q86XK7 387 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 CELF4Q9BZC1 486 aaKnown RBP13.3□□□□□ -0.28
PRPF4-202ENST00000374199 DCLK3Q9C098 648 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 HTTP42858 3142 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 SETSIPP0DME0 302 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 CYP2B6P20813 491 aa13.3□□□□□ -0.28
PRPF4-202ENST00000374199 ZNF200P98182 395 aaPredicted RBP13.3□□□□□ -0.28
PRPF4-202ENST00000374199 PDCLQ13371 301 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms