RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 REXO2Q9Y3B8 237 aaKnown RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 REV3LO60673 3130 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 MYO7AQ13402 2215 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 GABRDO14764 452 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 FANCGO15287 622 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 TACC1O75410 805 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 SERPING1P05155 500 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 FERP16591 822 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 ACAT1P24752 427 aaKnown RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 TKTP29401 623 aaKnown RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 GNL1P36915 607 aaPredicted RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 EIF4A3P38919 411 aaKnown RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 KIAA0319Q5VV43 1072 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 DPH6Q7L8W6 267 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 C12orf29Q8N999 325 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 MYRIPQ8NFW9 859 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 DDX1Q92499 740 aaKnown RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 SYT11Q9BT88 431 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 UBE2OQ9C0C9 1292 aaKnown RBP18.71■□□□□ 0.59
C9orf43-202ENST00000374165 STXBP5LQ9Y2K9 1186 aa18.71■□□□□ 0.59
C9orf43-202ENST00000374165 ATP2C2O75185 946 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 CAPN15O75808 1086 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 TDRD12Q587J7 1177 aaKnown RBP18.7■□□□□ 0.58
C9orf43-202ENST00000374165 ACOT1Q86TX2 421 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 PALB2Q86YC2 1186 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 CCDC170Q8IYT3 715 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 RTP3Q9BQQ7 232 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 COLEC11Q9BWP8 271 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 DNAI1Q9UI46 699 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 MYO9BQ13459 2157 aa18.7■□□□□ 0.58
C9orf43-202ENST00000374165 UQCRHLA0A096LP55 91 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 EFEMP2O95967 443 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 UQCRHP07919 91 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 CHRNB2P17787 502 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 ASTE1Q2TB18 679 aaPredicted RBP18.69■□□□□ 0.58
C9orf43-202ENST00000374165 TAF3Q5VWG9 929 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 TMEM176AQ96HP8 235 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 IGSF21Q96ID5 467 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 MTIF3Q9H2K0 278 aaKnown RBP18.69■□□□□ 0.58
C9orf43-202ENST00000374165 ADAMTS1Q9UHI8 967 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 NLRC5Q86WI3 1866 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 A8MXQ7 604 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 CYP11A1P05108 521 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 MMEP08473 750 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 FAM171A1Q5VUB5 890 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 FUT10Q6P4F1 479 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 DNAAF5Q86Y56 855 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 COLGALT1Q8NBJ5 622 aa18.69■□□□□ 0.58
C9orf43-202ENST00000374165 SP7Q8TDD2 431 aaPredicted RBP18.69■□□□□ 0.58
C9orf43-202ENST00000374165 IRX2Q9BZI1 471 aaPredicted RBP18.69■□□□□ 0.58
C9orf43-202ENST00000374165 DDX43Q9NXZ2 648 aaKnown RBP18.69■□□□□ 0.58
C9orf43-202ENST00000374165 ABL1P00519 1130 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 ODC1P11926 461 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 WARSP23381 471 aaKnown RBP18.68■□□□□ 0.58
C9orf43-202ENST00000374165 BRD2P25440 801 aaKnown RBP18.68■□□□□ 0.58
C9orf43-202ENST00000374165 GNA15P30679 374 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 CYLC1P35663 651 aaPredicted RBP18.68■□□□□ 0.58
C9orf43-202ENST00000374165 RGS19P49795 217 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 GNG11P61952 73 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 PSMC1P62191 440 aaKnown RBP18.68■□□□□ 0.58
C9orf43-202ENST00000374165 CEP57Q86XR8 500 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 GLYCTKQ8IVS8 523 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 SLC39A11Q8N1S5 342 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 FIBCD1Q8N539 461 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 ZNF606Q8WXB4 792 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 CLP1Q92989 425 aaKnown RBP18.68■□□□□ 0.58
C9orf43-202ENST00000374165 ZNF558Q96NG5 402 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 NT5C1AQ9BXI3 368 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 SNX25Q9H3E2 840 aa18.68■□□□□ 0.58
C9orf43-202ENST00000374165 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
C9orf43-202ENST00000374165 A0A087X0T9 212 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 ZNF263O14978 683 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 FAM228BP0C875 321 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 YWHAEP62258 255 aaKnown RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 GFPT1Q06210 699 aaPredicted RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 RTP2Q5QGT7 225 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 LNX1Q8TBB1 728 aaPredicted RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 CCDC42Q96M95 316 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 HEXIM2Q96MH2 286 aaKnown RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 WDR24Q96S15 920 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 TMEM209Q96SK2 561 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 PCDHB8Q9UN66 801 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 MYH10P35580 1976 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 PLXNA4Q9HCM2 1894 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 EIF3CLB5ME19 914 aaKnown RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 DDX3XO00571 662 aaKnown RBP eCLIP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 PBX2P40425 430 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 ARHGAP25P42331 645 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 FMO1Q01740 532 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 ARHGAP29Q52LW3 1261 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 OVOS1Q6IE37 1185 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 TMEM86AQ8N2M4 240 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 OR10T2Q8NGX3 314 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 PCDHB18PQ96TA0 734 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 EIF3CQ99613 913 aaKnown RBP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 AGPAT1Q99943 283 aa18.67■□□□□ 0.58
C9orf43-202ENST00000374165 SF3B1O75533 1304 aaKnown RBP eCLIP18.67■□□□□ 0.58
C9orf43-202ENST00000374165 EYSQ5T1H1 3165 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 THAP12O43422 761 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms