RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 IDH3BO43837 385 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 CBFA2T3O75081 653 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 LGR5O75473 907 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 NR3C1P04150 777 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 FAM86B2P0C5J1 330 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 CTNNA1P35221 906 aaKnown RBP8.65□□□□□ -1.02
GARNL3-201ENST00000373386 SEC24CP53992 1094 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 PLTPP55058 493 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 KIF22Q14807 665 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 SPCS2Q15005 226 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 C6orf89Q6UWU4 347 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 B3GNT9Q6UX72 402 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 HERVK_113Q902F9 699 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 NCSTNQ92542 709 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 P3H4Q92791 437 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 SLC35C1Q96A29 364 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 PACSIN1Q9BY11 444 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 TRPC7Q9HCX4 862 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 CD93Q9NPY3 652 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 DMAC2Q9NW81 257 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 STXBP5LQ9Y2K9 1186 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 GMNCA6NCL1 334 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 H0YGN5 161 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ARHGAP33O14559 1287 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 OPLAHO14841 1288 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 RIMBP2O15034 1052 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 YKT6O15498 198 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 NDUFB10O96000 172 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 CDK4P11802 303 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 SP100P23497 879 aaPredicted RBP8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ECHS1P30084 290 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 PSMC2P35998 433 aaKnown RBP8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ARID5AQ03989 594 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ENPEPQ07075 957 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 POTEGQ6S5H5 508 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 C1orf186Q6ZWK4 172 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 NIPA1Q7RTP0 329 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 STKLD1Q8NE28 680 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 SLC30A5Q8TAD4 765 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 ANKRD36BP1Q96IX9 119 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 STRA6Q9BX79 667 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 SLITRK6Q9H5Y7 841 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 MOSPD1Q9UJG1 213 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 DSEQ9UL01 958 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 USTQ9Y2C2 406 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 NFS1Q9Y697 457 aa8.65□□□□□ -1.02
GARNL3-201ENST00000373386 IQANK1A0A1B0GTG1 560 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 DDTLA6NHG4 134 aaPredicted RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 GOLGA8JA6NMD2 632 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 GOLGA8MH3BSY2 632 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 NVLO15381 856 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 MAP3K13O43283 966 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 EXTL3O43909 919 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 PSMD10O75832 226 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 CCNG1P51959 295 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 RNASE9P60153 205 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 ELF3P78545 371 aaPredicted RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 PTK2Q05397 1052 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 ZNF844Q08AG5 666 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 PRR16Q569H4 304 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 HSP90AA5PQ58FG0 334 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 CMPK2Q5EBM0 449 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 IL23RQ5VWK5 629 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 OTOP1Q7RTM1 612 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 ZNF571Q7Z3V5 609 aaPredicted RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 SFR1Q86XK3 245 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 CLEC10AQ8IUN9 316 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 RHOT2Q8IXI1 618 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 C12orf56Q8IXR9 622 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 SAMD11Q96NU1 681 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 P2RX7Q99572 595 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 EIF2AK1Q9BQI3 630 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 SYT11Q9BT88 431 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 STK33Q9BYT3 514 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 WDR11Q9BZH6 1224 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.03
GARNL3-201ENST00000373386 C8orf4Q9NR00 106 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 SLC12A6Q9UHW9 1150 aa8.65□□□□□ -1.03
GARNL3-201ENST00000373386 ZMYM2Q9UBW7 1377 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 TRAPPC3O43617 180 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 RNGTTO60942 597 aaKnown RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 AKAP3O75969 853 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 EIF2S1P05198 315 aaKnown RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 PAEPP09466 180 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 CTRB1P17538 263 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 AP3M2P53677 418 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 PPP2R2AP63151 447 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 TRADDQ15628 312 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 UAP1Q16222 522 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 KRT71Q3SY84 523 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 FKBP1CQ5VVH2 108 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SNX30Q5VWJ9 437 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 CTRB2Q6GPI1 263 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 RINT1Q6NUQ1 792 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms