RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CHRNA3P32297 505 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 NDST1P52848 882 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 DHX34Q14147 1143 aaKnown RBP26.47■■□□□ 1.83
CTSA-203ENST00000372459 DCUN1D2Q6PH85 259 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 RSPH3Q86UC2 560 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 C3orf20Q8ND61 904 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 CALCOCO1Q9P1Z2 691 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 KIAA1257Q9ULG3 409 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.47■■□□□ 1.83
CTSA-203ENST00000372459 GJB6O95452 261 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 HMGCRP04035 888 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 ATF7P17544 494 aaPredicted RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 RPL7AP62424 266 aaKnown RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 MRPS6P82932 125 aaKnown RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 DR1Q01658 176 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 CACNB2Q08289 660 aaPredicted RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 CNGA2Q16280 664 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 SGO2Q562F6 1265 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 GLRA4Q5JXX5 417 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 PRELID2Q8N945 189 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 C18orf25Q96B23 403 aaPredicted RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 DDX27Q96GQ7 796 aaKnown RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 MCEEQ96PE7 176 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 NT5C1AQ9BXI3 368 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 PARP2Q9UGN5 583 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 XPOTO43592 962 aaKnown RBP26.46■■□□□ 1.83
CTSA-203ENST00000372459 TRIM32Q13049 653 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 PTPN20Q4JDL3 420 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 RAB17Q9H0T7 212 aa26.46■■□□□ 1.83
CTSA-203ENST00000372459 FAM187AA6NFU0 413 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 MICAL2O94851 1124 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 CD4P01730 458 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 TRADDQ15628 312 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 PPP1R15BQ5SWA1 713 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 CYP4A22Q5TCH4 519 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 FAM228AQ86W67 206 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 MAGOHBQ96A72 148 aaKnown RBP26.45■■□□□ 1.82
CTSA-203ENST00000372459 XPNPEP3Q9NQH7 507 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 USTQ9Y2C2 406 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 TRPV2Q9Y5S1 764 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 SNX9Q9Y5X1 595 aa26.45■■□□□ 1.82
CTSA-203ENST00000372459 CASP8AP2Q9UKL3 1982 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 FSCN2O14926 492 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 CYP1B1Q16678 543 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 XKR4Q5GH76 650 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 C9orf57Q5W0N0 161 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 GDF6Q6KF10 455 aaPredicted RBP26.44■■□□□ 1.82
CTSA-203ENST00000372459 MAIP1Q8WWC4 291 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 SEC14L1Q92503 715 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 RUNDC3BQ96NL0 473 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 WDR35Q9P2L0 1181 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 CYTH4Q9UIA0 394 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 IPPQ9Y573 584 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 CDY2AQ9Y6F7 541 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 PCNTO95613 3336 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 SMIM28A0A1B0GU29 152 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 M0QYV0 167 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 O00370 1275 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 PPEF2O14830 753 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 ADAMTS4O75173 837 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 KCNE1P15382 129 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 AARSP49588 968 aaKnown RBP eCLIP26.44■■□□□ 1.82
CTSA-203ENST00000372459 SP3Q02447 781 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 HLTFQ14527 1009 aaKnown RBP eCLIP26.44■■□□□ 1.82
CTSA-203ENST00000372459 HSP90B2PQ58FF3 399 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 TWF2Q6IBS0 349 aaKnown RBP26.44■■□□□ 1.82
CTSA-203ENST00000372459 ZDHHC14Q8IZN3 488 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 C18orf8Q96DM3 657 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 SYNCQ9H7C4 482 aa26.44■■□□□ 1.82
CTSA-203ENST00000372459 PDCD11Q14690 1871 aaKnown RBP26.44■■□□□ 1.82
CTSA-203ENST00000372459 AOC2O75106 756 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 SSR1P43307 286 aaKnown RBP26.43■■□□□ 1.82
CTSA-203ENST00000372459 GSCP56915 257 aaPredicted RBP26.43■■□□□ 1.82
CTSA-203ENST00000372459 TAS2R40P59535 323 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 PIGHQ14442 188 aaPredicted RBP26.43■■□□□ 1.82
CTSA-203ENST00000372459 FAM47CQ5HY64 1035 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 DAB2IPQ5VWQ8 1189 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 REM2Q8IYK8 340 aaPredicted RBP26.43■■□□□ 1.82
CTSA-203ENST00000372459 KATNAL2Q8IYT4 538 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 MED4Q9NPJ6 270 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 FAM114A2Q9NRY5 505 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 KLK14Q9P0G3 267 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 PCYOX1Q9UHG3 505 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 RASAL2Q9UJF2 1139 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 ADAM21Q9UKJ8 722 aa26.43■■□□□ 1.82
CTSA-203ENST00000372459 SCN1AP35498 2009 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 TCRBV7S2A1N4TA0A589 114 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 RARAP10276 462 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 STILQ15468 1287 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 SIX1Q15475 284 aaPredicted RBP26.42■■□□□ 1.82
CTSA-203ENST00000372459 CPXM1Q96SM3 734 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 RNF39Q9H2S5 420 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 RPLP2P05387 115 aaKnown RBP26.42■■□□□ 1.82
CTSA-203ENST00000372459 FAM153BP0C7A2 387 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 PSMC1P62191 440 aaKnown RBP26.42■■□□□ 1.82
CTSA-203ENST00000372459 FAM153CQ494X1 144 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 LCLAT1Q6UWP7 414 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 C12orf50Q8NA57 414 aaPredicted RBP26.42■■□□□ 1.82
CTSA-203ENST00000372459 SMG8Q8ND04 991 aaKnown RBP26.42■■□□□ 1.82
CTSA-203ENST00000372459 FAM71BQ8TC56 605 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms