RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.21□□□□□ -1.74
MCF2-203ENST00000370576 SLFN12Q8IYM2 578 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 MOSPD2Q8NHP6 518 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 OLIG1Q8TAK6 271 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 DIS3LQ8TF46 1054 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 SDR42E1Q8WUS8 393 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 NANOS1Q8WY41 292 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 SYTL4Q96C24 671 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 PDLIM5Q96HC4 596 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 PPP1R13BQ96KQ4 1090 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 USP28Q96RU2 1077 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CAPS2Q9BXY5 557 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 NMRK2Q9NPI5 230 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ZNF277Q9NRM2 450 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 USP40Q9NVE5 1235 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 PI4KBQ9UBF8 816 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 AASSQ9UDR5 926 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 SH3BGRL2Q9UJC5 107 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CDC23Q9UJX2 597 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 DDTLA6NHG4 134 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 TARM1B6A8C7 271 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 MEIS2O14770 477 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 STBD1O95210 358 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CPEP16870 476 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ALOX12P18054 663 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 BMP6P22004 513 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 GBP2P32456 591 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 ACTN2P35609 894 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ADCYAP1R1P41586 468 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 HNMTP50135 292 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 METAP2P50579 478 aaKnown RBP eCLIP4.21□□□□□ -1.74
MCF2-203ENST00000370576 RAD23AP54725 363 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 TMPRSS15P98073 1019 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CD83Q01151 205 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 AP1B1Q10567 949 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 MAP4K2Q12851 820 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 BLMHQ13867 455 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 BTG3Q14201 252 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 PDCD2Q16342 344 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 KIF4BQ2VIQ3 1234 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 SMUG1Q53HV7 270 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 KIAA1755Q5JYT7 1200 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 PTRH1Q86Y79 214 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 GPC2Q8N158 579 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ANKRD53Q8N9V6 530 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ADAM32Q8TC27 787 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 SHC3Q92529 594 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CLMNQ96JQ2 1002 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 GBP3Q9H0R5 595 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 MRPL44Q9H9J2 332 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 JMJD4Q9H9V9 463 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 WHRNQ9P202 907 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 SAP30BPQ9UHR5 308 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 KIF3AQ9Y496 699 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ASB3Q9Y575 518 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 PCDHB9Q9Y5E1 797 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ATG2AQ2TAZ0 1938 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CHD5Q8TDI0 1954 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 IGKV6D-21A0A0A0MT36 114 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 GOLGA6L7A0A1B0GV03 622 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 CCDC151A5D8V7 595 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 A8MXE2 369 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SUSD5O60279 629 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 KCNJ13O60928 360 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SPAG6O75602 509 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 FGFR1OPO95684 399 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 TTLL1O95922 423 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ITGB1P05556 798 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 PORP16435 677 aaPredicted RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 ABCB4P21439 1286 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 LONP1P36776 959 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 SREBF1P36956 1147 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 HADHAP40939 763 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SNAPC2Q13487 334 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 RTN1Q16799 776 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SLC5A9Q2M3M2 681 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 CYP27C1Q4G0S4 372 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 MFSD14BQ5SR56 506 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 MCTP1Q6DN14 999 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ARHGAP11AQ6P4F7 1023 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 TAX1BP1Q86VP1 789 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 NECAB1Q8N987 351 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SLC4A11Q8NBS3 891 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SMC1BQ8NDV3 1235 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 IFI44Q8TCB0 444 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ZNF507Q8TCN5 953 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 CLEC4DQ8WXI8 215 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 MRPL38Q96DV4 380 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 PYM1Q9BRP8 204 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 ST6GALNAC4Q9H4F1 302 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 CACNA2D2Q9NY47 1150 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 TFCP2L1Q9NZI6 479 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 VAV3Q9UKW4 847 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 GPRIN2O60269 458 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ERAL1O75616 437 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 PLEKHA8P1O95397 391 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 CSTBP04080 98 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 SNRNP70P08621 437 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 MYBL2P10244 700 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 PDGFRAP16234 1089 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms