RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 ITIH3Q06033 890 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 PTP4A2Q12974 167 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 ORC1Q13415 861 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 IFI16Q16666 785 aaKnown RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 MEI1Q5TIA1 1274 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 ANKRD33Q7Z3H0 272 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 ECHDC2Q86YB7 292 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 PHF13Q86YI8 300 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 RHOT2Q8IXI1 618 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 MCOLN2Q8IZK6 566 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 TTC39CQ8N584 583 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 CPA5Q8WXQ8 436 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 ARMC5Q96C12 935 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 TMEM176AQ96HP8 235 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 MRPL45Q9BRJ2 306 aaKnown RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 GOLPH3Q9H4A6 298 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 RSAD1Q9HA92 442 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 MED4Q9NPJ6 270 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 SLC38A7Q9NVC3 462 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 PSD3Q9NYI0 1048 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 CALCOCO1Q9P1Z2 691 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 TTC3P53804 2025 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 NCK2O43639 380 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 LSM8O95777 96 aaKnown RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 FTCDO95954 541 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 COL6A1P12109 1028 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 TAF6P49848 677 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 SCNN1GP51170 649 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 NDST1P52848 882 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 BFSP2Q13515 415 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 KBTBD7Q8WVZ9 684 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 ZNF653Q96CK0 615 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
VANGL1-203ENST00000369509 AVENQ9NQS1 362 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-203ENST00000369509 H3BQF6 201 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 BUB1BO60566 1050 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 PQBP1O60828 265 aaKnown RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 THP07101 528 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 SKIP12755 728 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 IGFBP6P24592 240 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 PAFAH1B1P43034 410 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 NSFP46459 744 aaKnown RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 LILRA4P59901 499 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 SV2CQ496J9 727 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 SLC39A5Q6ZMH5 540 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 ZNF572Q7Z3I7 529 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 MMGT1Q8N4V1 131 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 CACNG4Q9UBN1 327 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 CHORDC1Q9UHD1 332 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 STXBP5LQ9Y2K9 1186 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 KIAA0100Q14667 2235 aaKnown RBP11.78□□□□□ -0.52
VANGL1-203ENST00000369509 LTBP2Q14767 1821 aa11.78□□□□□ -0.52
VANGL1-203ENST00000369509 FNDC1Q4ZHG4 1894 aaPredicted RBP11.77□□□□□ -0.52
VANGL1-203ENST00000369509 MYBL1P10243 752 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 MMP8P22894 467 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 FAM189BP81408 668 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 PLEKHG4Q58EX7 1191 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 C1orf53Q5VUE5 145 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 PPP1R2P3Q6NXS1 205 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 GOLGA6L1Q8N7Z2 621 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 C1orf131Q8NDD1 294 aaKnown RBP11.77□□□□□ -0.52
VANGL1-203ENST00000369509 PGBD4Q96DM1 585 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 VCPIP1Q96JH7 1222 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 CALR3Q96L12 384 aaKnown RBP11.77□□□□□ -0.52
VANGL1-203ENST00000369509 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 LHX5Q9H2C1 402 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 RNF216Q9NWF9 866 aaPredicted RBP11.77□□□□□ -0.52
VANGL1-203ENST00000369509 VPS18Q9P253 973 aa11.77□□□□□ -0.52
VANGL1-203ENST00000369509 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.52
VANGL1-203ENST00000369509 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.77□□□□□ -0.52
VANGL1-203ENST00000369509 O00370 1275 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 ZNF185O15231 689 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 FGFR1P11362 822 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 VDRP11473 427 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 CD19P15391 556 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 RRM1P23921 792 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
VANGL1-203ENST00000369509 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
VANGL1-203ENST00000369509 C2orf54Q08AI8 447 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 GRIK3Q13003 919 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 C2CD6Q53TS8 623 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 C11orf63Q6NUN7 778 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 LLGL2Q6P1M3 1020 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 DENND1BQ6P3S1 775 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 SLC24A5Q71RS6 500 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 NT5DC3Q86UY8 548 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 UNC93AQ86WB7 457 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 RNF169Q8NCN4 708 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 C3orf58Q8NDZ4 430 aa11.77□□□□□ -0.53
VANGL1-203ENST00000369509 DIS3LQ8TF46 1054 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms