RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 M0QYV0 167 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 O00370 1275 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 PDE2AO00408 941 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-202ENST00000369409 MICAL2O94851 1124 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 C1QTNF8P60827 252 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 ZNF598Q86UK7 904 aaKnown RBP17.84■□□□□ 0.45
PHGDH-202ENST00000369409 WDTC1Q8N5D0 677 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 APPL2Q8NEU8 664 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 GOLGA1Q92805 767 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 ANAPC7Q9UJX3 599 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 PODXLO00592 558 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 KCNK3O14649 394 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 HCRTO43612 131 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 POMCP01189 267 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 FGFR1P11362 822 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 CLCNKBP51801 687 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 ACOT1Q86TX2 421 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 RTN4RL1Q86UN2 441 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-202ENST00000369409 C12orf29Q8N999 325 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 UBXN4Q92575 508 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 HES6Q96HZ4 224 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 LHX5Q9H2C1 402 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 SMARCAL1Q9NZC9 954 aa17.83■□□□□ 0.44
PHGDH-202ENST00000369409 A8MXQ7 604 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 C9IYK1 514 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 HUS1O60921 280 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 NBNO60934 754 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CALB1P05937 261 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 IGFBP6P24592 240 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CCDC181Q5TID7 509 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 RSRC2Q7L4I2 434 aaKnown RBP17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CTU1Q7Z7A3 348 aaKnown RBP17.82■□□□□ 0.44
PHGDH-202ENST00000369409 UNC93AQ86WB7 457 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 ADGRF2Q8IZF7 708 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 RABGGTAQ92696 567 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 ZNF333Q96JL9 665 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 TRIM7Q9C029 511 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 DPEP3Q9H4B8 488 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CYTH4Q9UIA0 394 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 TSPAN16Q9UKR8 245 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 ALG6Q9Y672 507 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 MNX1P50219 401 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-202ENST00000369409 GRIK3Q13003 919 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CNGA2Q16280 664 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 PTPN20Q4JDL3 420 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 PLEKHA7Q6IQ23 1121 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 ERICH1Q86X53 443 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CPNE8Q86YQ8 564 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 C3orf58Q8NDZ4 430 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 MS4A14Q96JA4 679 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 PAAF1Q9BRP4 392 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 CRISPLD2Q9H0B8 497 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 SNX25Q9H3E2 840 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 FAM49BQ9NUQ9 324 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 KIAA1257Q9ULG3 409 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-202ENST00000369409 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
PHGDH-202ENST00000369409 GJB6O95452 261 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 COMTP21964 271 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 MAMLD1Q13495 774 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 GOLGA7BQ2TAP0 167 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 CYP4A22Q5TCH4 519 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 FBXO46Q6PJ61 603 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-202ENST00000369409 SLC24A5Q71RS6 500 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 LIMS2Q7Z4I7 341 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 PDCL2Q8N4E4 241 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 TOP6BLQ8N6T0 577 aa17.81■□□□□ 0.44
PHGDH-202ENST00000369409 MRPL47Q9HD33 250 aaKnown RBP17.81■□□□□ 0.44
PHGDH-202ENST00000369409 CYB561D2O14569 222 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 DDX3YO15523 660 aaKnown RBP17.8■□□□□ 0.44
PHGDH-202ENST00000369409 PDGFRBP09619 1106 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 GPNMBQ14956 572 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 PPP1R26Q5T8A7 1209 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-202ENST00000369409 LCLAT1Q6UWP7 414 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 SLC39A5Q6ZMH5 540 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 OSTM1Q86WC4 334 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 NOA1Q8NC60 698 aaKnown RBP17.8■□□□□ 0.44
PHGDH-202ENST00000369409 UBA3Q8TBC4 463 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 FTHL17Q9BXU8 183 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 PARVAQ9NVD7 372 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 TJP2Q9UDY2 1190 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 SPOPO43791 374 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 HSPA8P11142 646 aaKnown RBP17.8■□□□□ 0.44
PHGDH-202ENST00000369409 LMO2P25791 158 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 GNL1P36915 607 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-202ENST00000369409 PAFAH1B1P43034 410 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 C2orf54Q08AI8 447 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 STILQ15468 1287 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 UPP1Q16831 310 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 DNAJC24Q6P3W2 148 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 DIS3LQ8TF46 1054 aaKnown RBP17.8■□□□□ 0.44
PHGDH-202ENST00000369409 SENP8Q96LD8 212 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 CPXM1Q96SM3 734 aa17.8■□□□□ 0.44
PHGDH-202ENST00000369409 MICAL3Q7RTP6 2002 aa17.79■□□□□ 0.44
PHGDH-202ENST00000369409 CES2O00748 559 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms