RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 LRRC8DQ7L1W4 858 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 ECHDC2Q86YB7 292 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 UBA3Q8TBC4 463 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 HEXIM2Q96MH2 286 aaKnown RBP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 FAM49BQ9NUQ9 324 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 MICAL3Q7RTP6 2002 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 EFCAB8A8MWE9 144 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 CAND2O75155 1236 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 P4HA1P13674 534 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 COMTP21964 271 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 MAMLD1Q13495 774 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 RPS6KA1Q15418 735 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 AADACL2Q6P093 401 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 CD300LGQ6UXG3 332 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 CPXM1Q96SM3 734 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 TSPYL2Q9H2G4 693 aaPredicted RBP14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 AVENQ9NQS1 362 aaPredicted RBP14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 GDAP2Q9NXN4 497 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 INPP5FQ9Y2H2 1132 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 GIT1Q9Y2X7 761 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 TTC3P53804 2025 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 C9IYK1 514 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 KCNK3O14649 394 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 PDGFRBP09619 1106 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 TAF6P49848 677 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 RPL7AP62424 266 aaKnown RBP14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 MRPS25P82663 173 aaKnown RBP14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 IFI16Q16666 785 aaKnown RBP14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 PPP1R26Q5T8A7 1209 aaPredicted RBP14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 C11orf63Q6NUN7 778 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 CD101Q93033 1021 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 RSAD1Q9HA92 442 aa14.97□□□□□ -0.01
HMGCS2-201ENST00000369406 VWA8A3KMH1 1905 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 I3L4J1 428 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 PIK3R2O00459 728 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 LSM8O95777 96 aaKnown RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 SELPP16109 830 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 OGDHQ02218 1023 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ZNF252P-AS1Q0IIN9 211 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 TUBB2AQ13885 445 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 PAN2Q504Q3 1202 aaKnown RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 CLLU1OSQ5K130 101 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 KIAA0319Q5VV43 1072 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 TTC30AQ86WT1 665 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 CEP112Q8N8E3 955 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ANKRD7Q92527 254 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 TUBB2BQ9BVA1 445 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 NT5C1AQ9BXI3 368 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 RGS18Q9NS28 235 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ANAPC7Q9UJX3 599 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 SQORQ9Y6N5 450 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 FNDC1Q4ZHG4 1894 aaPredicted RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 M0QYV0 167 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 PODXLO00592 558 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ATP2C2O75185 946 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 GABBR2O75899 941 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ERBB2P04626 1255 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ITGB1P05556 798 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 THP07101 528 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 TCP1P17987 556 aaKnown RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 GPD2P43304 727 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 OR6B3Q8NGW1 331 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 SCLYQ96I15 445 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 RPS6KC1Q96S38 1066 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 CRISPLD2Q9H0B8 497 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 ANKZF1Q9H8Y5 726 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 UVRAGQ9P2Y5 699 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 TSPAN16Q9UKR8 245 aa14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 TIMM13Q9Y5L4 95 aaPredicted RBP14.96□□□□□ -0.01
HMGCS2-201ENST00000369406 CTAGE15A4D2H0 777 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 VDRP11473 427 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 CCDC130P13994 396 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF211Q13398 564 aaPredicted RBP14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 GOLGA7BQ2TAP0 167 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 WSCD1Q658N2 575 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 CTAGE6Q86UF2 777 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 TMEM35BQ8NCS4 154 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 PIWIL1Q96J94 861 aaKnown RBP14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF333Q96JL9 665 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF560Q96MR9 790 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 WNT8AQ9H1J5 351 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 LHX5Q9H2C1 402 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 AMFRQ9UKV5 643 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 NLRC5Q86WI3 1866 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 PTPRDP23468 1912 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 TCF4P15884 667 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 ACAT1P24752 427 aaKnown RBP14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 TKTP29401 623 aaKnown RBP14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 RAB27AP51159 221 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 C1QTNF8P60827 252 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 PSMC1P62191 440 aaKnown RBP14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 UPP1Q16831 310 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 PKDCCQ504Y2 493 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms