RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 KIFAP3Q92845 792 aa10.74□□□□□ -0.69
TPM3-210ENST00000368530 DDX23Q9BUQ8 820 aaKnown RBP10.74□□□□□ -0.69
TPM3-210ENST00000368530 NUP58Q9BVL2 599 aa10.74□□□□□ -0.69
TPM3-210ENST00000368530 LSM14BQ9BX40 385 aaKnown RBP10.74□□□□□ -0.69
TPM3-210ENST00000368530 PIDD1Q9HB75 910 aa10.74□□□□□ -0.69
TPM3-210ENST00000368530 ARHGEF3Q9NR81 526 aa10.74□□□□□ -0.69
TPM3-210ENST00000368530 CAPN11Q9UMQ6 739 aa10.74□□□□□ -0.69
TPM3-210ENST00000368530 SIT1Q9Y3P8 196 aa10.74□□□□□ -0.69
TPM3-210ENST00000368530 DNAH14Q0VDD8 3507 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 EXOC3O60645 756 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 KIF4AO95239 1232 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 SP9P0CG40 484 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 TNNT1P13805 278 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 PSMC2P35998 433 aaKnown RBP10.73□□□□□ -0.69
TPM3-210ENST00000368530 SMTNP53814 917 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 APBA1Q02410 837 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 KCNMA1Q12791 1236 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 KCNH2Q12809 1159 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 TUSC3Q13454 348 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
TPM3-210ENST00000368530 DCLRE1AQ6PJP8 1040 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 CD300LGQ6UXG3 332 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 C1orf210Q8IVY1 113 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 RDH13Q8NBN7 331 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 PJA1Q8NG27 643 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 NEK11Q8NG66 645 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 OR8K1Q8NGG5 319 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 GOLGA5Q8TBA6 731 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 RMDN1Q96DB5 314 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 NAA15Q9BXJ9 866 aaKnown RBP10.73□□□□□ -0.69
TPM3-210ENST00000368530 FOXQ1Q9C009 403 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 TRIM6Q9C030 488 aaPredicted RBP10.73□□□□□ -0.69
TPM3-210ENST00000368530 TTYH3Q9C0H2 523 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 TMEM206Q9H813 350 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 PARP2Q9UGN5 583 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 CDH7Q9ULB5 785 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 FRMD4BQ9Y2L6 1034 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 PPP2R2CQ9Y2T4 447 aa10.73□□□□□ -0.69
TPM3-210ENST00000368530 ZFP37Q9Y6Q3 630 aaPredicted RBP10.73□□□□□ -0.69
TPM3-210ENST00000368530 COL4A3Q01955 1670 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 MTCL1Q9Y4B5 1905 aaKnown RBP10.72□□□□□ -0.69
TPM3-210ENST00000368530 OTOGLQ3ZCN5 2332 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 CASTOR2A6NHX0 329 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 AFPP02771 609 aaKnown RBP10.72□□□□□ -0.69
TPM3-210ENST00000368530 HNRNPA1P09651 372 aaKnown RBP eCLIP10.72□□□□□ -0.69
TPM3-210ENST00000368530 FSHRP23945 695 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 HOXA9P31269 272 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 ZBED6P86452 979 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 GTF2BQ00403 316 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 CREMQ03060 361 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 NFIL3Q16649 462 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 RSPO2Q6UXX9 243 aaPredicted RBP10.72□□□□□ -0.69
TPM3-210ENST00000368530 TMTC1Q8IUR5 882 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 HACE1Q8IYU2 909 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 TMEM161BQ8NDZ6 487 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 ZNF397Q8NF99 534 aaPredicted RBP10.72□□□□□ -0.69
TPM3-210ENST00000368530 ITFG1Q8TB96 612 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 HASPINQ8TF76 798 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 FGF13Q92913 245 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 PRIMPOLQ96LW4 560 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 DNAJC7Q99615 494 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 CHP1Q99653 195 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 CBWD1Q9BRT8 395 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 TTPALQ9BTX7 342 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 CCDC113Q9H0I3 377 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 PDZD7Q9H5P4 517 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 METTL14Q9HCE5 456 aaKnown RBP10.72□□□□□ -0.69
TPM3-210ENST00000368530 KCND1Q9NSA2 647 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 PRMT7Q9NVM4 692 aaPredicted RBP10.72□□□□□ -0.69
TPM3-210ENST00000368530 DMAC2Q9NW81 257 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 SNTG2Q9NY99 539 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 TBX20Q9UMR3 447 aa10.72□□□□□ -0.69
TPM3-210ENST00000368530 SF3B1O75533 1304 aaKnown RBP eCLIP10.72□□□□□ -0.697e-7■■■■■ 108.6
TPM3-210ENST00000368530 GPR179Q6PRD1 2367 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 DOCK6Q96HP0 2047 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 GOLGA8IPA6NC78 632 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 SHISA7A6NL88 538 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 GOLGA8JA6NMD2 632 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 ANKRD63C9JTQ0 380 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 CCP110O43303 1012 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 ZSCAN12O43309 604 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 POU2F2P09086 479 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 FECHP22830 423 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 RAB33AQ14088 237 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 PSMD5Q16401 504 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 FIGNQ5HY92 759 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 EEF1DP3Q658K8 133 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 RRAGAQ7L523 313 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 SUMF1Q8NBK3 374 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 ACRBPQ8NEB7 543 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 ZSWIM2Q8NEG5 633 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 ST6GALNAC4Q9H4F1 302 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 NLRC4Q9NPP4 1024 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 EXOC7Q9UPT5 735 aa10.71□□□□□ -0.69
TPM3-210ENST00000368530 MTF2Q9Y483 593 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms