RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FRYLO94915 3013 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 MYBPHLA2RUH7 354 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 SLC38A8A6NNN8 435 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 SYT1P21579 422 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 CDC25CP30307 473 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 SOX9P48436 509 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 KPNA1P52294 538 aaPredicted RBP17.28■□□□□ 0.36
CKS1B-202ENST00000368436 WNT7BP56706 349 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 WDR44Q5JSH3 913 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 RALGPS2Q86X27 583 aaPredicted RBP17.28■□□□□ 0.36
CKS1B-202ENST00000368436 ACCSQ96QU6 501 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
CKS1B-202ENST00000368436 CEP250Q9BV73 2442 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 SPECC1L-ADORA2AF8WAN1 911 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 DPYSL4O14531 572 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 PRAMEF12O95522 483 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 GARTP22102 1010 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 CTHP32929 405 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 TXLNAP40222 546 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 PNPLA4P41247 253 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 CXCL12P48061 93 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 CYP4F8P98187 520 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 LRRC32Q14392 662 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 DGKKQ5KSL6 1271 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 CCDC73Q6ZRK6 1079 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 DGLUCYQ7Z3D6 616 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 BRSK2Q8IWQ3 736 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 DCP1BQ8IZD4 617 aaKnown RBP17.27■□□□□ 0.36
CKS1B-202ENST00000368436 SPEM1Q8N4L4 309 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 ZSWIM2Q8NEG5 633 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 BPIFB1Q8TDL5 484 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 SECISBP2LQ93073 1101 aaKnown RBP17.27■□□□□ 0.36
CKS1B-202ENST00000368436 ZFYVE19Q96K21 471 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 ZNF560Q96MR9 790 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 FAM213AQ9BRX8 229 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 GTSE1Q9NYZ3 720 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 TBC1D7Q9P0N9 293 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 ZMYM5Q9UJ78 669 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
CKS1B-202ENST00000368436 DNAH14Q0VDD8 3507 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 PAPSS2O95340 614 aaPredicted RBP17.26■□□□□ 0.35
CKS1B-202ENST00000368436 GCNT3O95395 438 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 LDHAP00338 332 aaKnown RBP17.26■□□□□ 0.35
CKS1B-202ENST00000368436 HMGA1P17096 107 aaKnown RBP17.26■□□□□ 0.35
CKS1B-202ENST00000368436 TGM1P22735 817 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 CDR1P51861 262 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 CASP5P51878 434 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 PLCB2Q00722 1185 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 SATB1Q01826 763 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 ALCAMQ13740 583 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 TXNDC11Q6PKC3 985 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 TMEM150AQ86TG1 271 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 CELF5Q8N6W0 485 aaKnown RBP17.26■□□□□ 0.35
CKS1B-202ENST00000368436 CXorf38Q8TB03 319 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 GIPC2Q8TF65 315 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 GCNAQ96QF7 691 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 TMLHEQ9NVH6 421 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 ABI2Q9NYB9 513 aaPredicted RBP17.26■□□□□ 0.35
CKS1B-202ENST00000368436 PCDHB5Q9Y5E4 795 aa17.26■□□□□ 0.35
CKS1B-202ENST00000368436 SOBPA7XYQ1 873 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 F11P03951 625 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 ITGB3P05106 788 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 TFAMQ00059 246 aaKnown RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 CEBPZQ03701 1054 aaKnown RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 TAF12Q16514 161 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 RSPO4Q2I0M5 234 aaPredicted RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 PDCL2Q8N4E4 241 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 LRRC52Q8N7C0 313 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 CACTINQ8WUQ7 758 aaKnown RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 LEO1Q8WVC0 666 aaPredicted RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 SAAL1Q96ER3 474 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 ACBD6Q9BR61 282 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 RBM12Q9NTZ6 932 aaKnown RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 RBAKQ9NYW8 714 aaPredicted RBP17.25■□□□□ 0.35
CKS1B-202ENST00000368436 AGAP1Q9UPQ3 857 aa17.25■□□□□ 0.35
CKS1B-202ENST00000368436 A0A087X0B3 334 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 MED19A0JLT2 244 aaPredicted RBP17.24■□□□□ 0.35
CKS1B-202ENST00000368436 K7ESF4 209 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 IDEP14735 1019 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 STAT6P42226 847 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 NLRP12P59046 1061 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 TSPY1Q01534 308 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 TNK2Q07912 1038 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 CCINQ13939 588 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 NFE2Q16621 373 aaPredicted RBP17.24■□□□□ 0.35
CKS1B-202ENST00000368436 SCARA3Q6AZY7 606 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 CMTM8Q8IZV2 173 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 TMEM86AQ8N2M4 240 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 SYNPOQ8N3V7 929 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
CKS1B-202ENST00000368436 USP28Q96RU2 1077 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 PKMYT1Q99640 499 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms