RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 GRM4Q14833 912 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 TERF2Q15554 542 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 ELF2Q15723 593 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 WHAMMP3Q1A5X7 153 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 ARHGAP29Q52LW3 1261 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 FIGNQ5HY92 759 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 WWC2Q6AWC2 1192 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 TAPT1Q6NXT6 567 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 RSRC2Q7L4I2 434 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 ARMCX6Q7L4S7 300 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 APTXQ7Z2E3 356 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 RAB11FIP4Q86YS3 637 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 CCDC170Q8IYT3 715 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 BLIDQ8IZY5 108 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 SPICE1Q8N0Z3 855 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 EFHBQ8N7U6 833 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 PDILTQ8N807 584 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 FLCNQ8NFG4 579 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 CPLX3Q8WVH0 158 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 DHX58Q96C10 678 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 OSBPL1AQ9BXW6 950 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 DHX36Q9H2U1 1008 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 FBRSQ9HAH7 460 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 ARFGAP3Q9NP61 516 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 INTS13Q9NVM9 706 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 CDC23Q9UJX2 597 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 PRDM4Q9UKN5 801 aa7.09□□□□□ -1.27
ECHDC1-202ENST00000368289 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 ABHD14A-ACY1A0A1B0GW23 586 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 CTAGE9A4FU28 777 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 VWA5AO00534 786 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 N4BP3O15049 544 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 EIF3JO75822 258 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 FLOT1O75955 427 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 RHOBTB3O94955 611 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 RPN1P04843 607 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 STAT3P40763 770 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 UBA7P41226 1012 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 CNTN2Q02246 1040 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 NPY5RQ15761 445 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 NKG7Q16617 165 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 ERCC6LQ2NKX8 1250 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 TRIM71Q2Q1W2 868 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 NAALADL2Q58DX5 795 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 TCP11X2Q5H9J9 407 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 C12orf60Q5U649 245 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 PRAMEF13Q5VWM6 474 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 IQCEQ6IPM2 695 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 ZNF746Q6NUN9 644 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 SRGAP1Q7Z6B7 1085 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 SLFN12Q8IYM2 578 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 UBALD2Q8IYN6 164 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 ZNF444Q8N0Y2 327 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 FAM133AQ8N9E0 248 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 MIGA1Q8NAN2 632 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 OR8K1Q8NGG5 319 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 FEZF2Q8TBJ5 459 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 ATP8B4Q8TF62 1192 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 SDR42E1Q8WUS8 393 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 PSMG3-AS1Q96PY0 264 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 HNRNPABQ99729 332 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 SPZ1Q9BXG8 430 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 RAB34Q9BZG1 259 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 EDEM3Q9BZQ6 932 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 GLT8D2Q9H1C3 349 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 HAUS4Q9H6D7 363 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 PSD3Q9NYI0 1048 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 GMIPQ9P107 970 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 VPS54Q9P1Q0 977 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 MAGEC2Q9UBF1 373 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 KLHL3Q9UH77 587 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 RAB21Q9UL25 225 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 SORCS3Q9UPU3 1222 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 COL4A3Q01955 1670 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 NAV1Q8NEY1 1877 aa7.08□□□□□ -1.28
ECHDC1-202ENST00000368289 FOCADQ5VW36 1801 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 PVALEFA0A1B0GWK0 134 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 ANO9A1A5B4 782 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 SLC22A31A6NKX4 558 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 WDR64B1ANS9 1081 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 C2CD4DB7Z1M9 353 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 TMEM232C9JQI7 657 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 SLC30A4O14863 429 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 CLSTN1O94985 981 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 IPO7O95373 1038 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 CYLC1P35663 651 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 STAT6P42226 847 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 NOVP48745 357 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 COPB1P53618 953 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 CKAP4Q07065 602 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 CDK5R2Q13319 367 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 KCNC3Q14003 757 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 PDIA5Q14554 519 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 CCDC6Q16204 474 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 MAP9Q49MG5 647 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 RRAGBQ5VZM2 374 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 FBXW10Q5XX13 1052 aa7.07□□□□□ -1.28
ECHDC1-202ENST00000368289 ISM2Q6H9L7 571 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms