RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GSCP56915 257 aaPredicted RBP14.84□□□□□ -0.03
USF1-202ENST00000368020 GNGT1P63211 74 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 PTK6Q13882 451 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 DCUN1D2Q6PH85 259 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 ZDHHC24Q6UX98 284 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 TRMT10CQ7L0Y3 403 aaKnown RBP14.84□□□□□ -0.03
USF1-202ENST00000368020 ERICH1Q86X53 443 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 FBXO25Q8TCJ0 367 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 TRAPPC12Q8WVT3 735 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 SNF8Q96H20 258 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 ADPGKQ9BRR6 497 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 MIS12Q9H081 205 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 RNPEPQ9H4A4 650 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 CNOT10Q9H9A5 744 aaKnown RBP14.84□□□□□ -0.03
USF1-202ENST00000368020 AKT3Q9Y243 479 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 Q9Y3F1 56 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 STAU1O95793 577 aaKnown RBP14.83□□□□□ -0.03
USF1-202ENST00000368020 CYBAP13498 195 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 CD58P19256 250 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 FLT3P36888 993 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 ADCYAP1R1P41586 468 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 KRT17Q04695 432 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 ADCY2Q08462 1091 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 KLF1Q13351 362 aaPredicted RBP14.83□□□□□ -0.03
USF1-202ENST00000368020 KRT71Q3SY84 523 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 ODF2Q5BJF6 829 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 KCTD16Q68DU8 428 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 ZDHHC14Q8IZN3 488 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 CCDC89Q8N998 374 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 RAET1EQ8TD07 263 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 FNIP1Q8TF40 1166 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 ZBTB9Q96C00 473 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 TMEM109Q9BVC6 243 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 FOXP3Q9BZS1 431 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 DCLK3Q9C098 648 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 ITGA11Q9UKX5 1188 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 C2CD2Q9Y426 696 aa14.83□□□□□ -0.03
USF1-202ENST00000368020 RRN3P2A6NIE6 340 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 H3BRB1 525 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 B4GALT5O43286 388 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 TJP3O95049 919 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 CALCAP01258 141 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 HMGCRP04035 888 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 STAG3L1P0CL83 205 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 CXCL8P10145 99 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 SMPD1P17405 629 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 DCAF4L1Q3SXM0 396 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 EEF1DP3Q658K8 133 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 DRICH1Q6PGQ1 229 aaPredicted RBP14.83□□□□□ -0.04
USF1-202ENST00000368020 POLNQ7Z5Q5 900 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 SPATS2Q86XZ4 545 aaKnown RBP14.83□□□□□ -0.04
USF1-202ENST00000368020 PGM2Q96G03 612 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 OSBPL8Q9BZF1 889 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 TUT1Q9H6E5 874 aaKnown RBP14.83□□□□□ -0.04
USF1-202ENST00000368020 GNEQ9Y223 722 aaKnown RBP14.83□□□□□ -0.04
USF1-202ENST00000368020 PTPN22Q9Y2R2 807 aa14.83□□□□□ -0.04
USF1-202ENST00000368020 TCRBV5S1A1TA0A578 114 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 TCRBV7S2A1N4TA0A589 114 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 KRT19P08727 400 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 AKR1A1P14550 325 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 BRD2P25440 801 aaKnown RBP14.82□□□□□ -0.04
USF1-202ENST00000368020 IGBP1P78318 339 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 BYSLQ13895 437 aaKnown RBP14.82□□□□□ -0.04
USF1-202ENST00000368020 AMHR2Q16671 573 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 DGKDQ16760 1214 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 MAP3K21Q5TCX8 1036 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 MTHFD1LQ6UB35 978 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 SH2D3CQ8N5H7 860 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 SLAIN1Q8ND83 568 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 AFG1LQ8WV93 481 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 C16orf70Q9BSU1 422 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 TRAIPQ9BWF2 469 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 FRMD8P1Q9BZ68 369 aaPredicted RBP14.82□□□□□ -0.04
USF1-202ENST00000368020 TRIM7Q9C029 511 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 CENPHQ9H3R5 247 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 PDZD7Q9H5P4 517 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 ASIC3Q9UHC3 531 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 KIAA1257Q9ULG3 409 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 EFR3BQ9Y2G0 817 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 GRIN2DO15399 1336 aa14.82□□□□□ -0.04
USF1-202ENST00000368020 A0A087WZ62 844 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 CFHP08603 1231 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 RALAP11233 206 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 ATF2P15336 505 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 MDH1P40925 334 aaKnown RBP14.81□□□□□ -0.04
USF1-202ENST00000368020 SSR1P43307 286 aaKnown RBP14.81□□□□□ -0.04
USF1-202ENST00000368020 NFX1Q12986 1120 aaKnown RBP14.81□□□□□ -0.04
USF1-202ENST00000368020 TMEM132DQ14C87 1099 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 ACAP1Q15027 740 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 STILQ15468 1287 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 C6orf118Q5T5N4 469 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 ZNF365Q70YC5 407 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 CPNE8Q86YQ8 564 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 SCLT1Q96NL6 688 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 FDXACB1Q9BRP7 624 aaPredicted RBP14.81□□□□□ -0.04
USF1-202ENST00000368020 ROPN1BQ9BZX4 212 aaPredicted RBP14.81□□□□□ -0.04
USF1-202ENST00000368020 MINDY3Q9H8M7 445 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 ROPN1Q9HAT0 212 aaPredicted RBP14.81□□□□□ -0.04
USF1-202ENST00000368020 DERAQ9Y315 318 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms