RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RNF43Q68DV7 783 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 CCDC137Q6PK04 289 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 INTS8Q75QN2 995 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 SLC13A5Q86YT5 568 aaPredicted RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 RELL1Q8IUW5 271 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 BBOF1Q8ND07 529 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 LMO3Q8TAP4 145 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 MDM1Q8TC05 714 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 ALG3Q92685 438 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 ARHGEF26Q96DR7 871 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 HSD17B14Q9BPX1 270 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 C16orf70Q9BSU1 422 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 RUSC1Q9BVN2 902 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 BHMT2Q9H2M3 363 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 NOP53Q9NZM5 478 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 UVRAGQ9P2Y5 699 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 RAPGEFL1Q9UHV5 662 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 LGALS13Q9UHV8 139 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 RPL26L1Q9UNX3 145 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 SNX24Q9Y343 169 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 NR2E1Q9Y466 385 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 MSH4O15457 936 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 EFCAB14O75071 495 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 ATP5HO75947 161 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 CYP1A2P05177 515 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
USF1-201ENST00000368019 KRT13P13646 458 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 ITIH2P19823 946 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 HOXA13P31271 388 aaPredicted RBP12.22□□□□□ -0.45
USF1-201ENST00000368019 PSEN1P49768 467 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 SLC18A1P54219 525 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 NCALDP61601 193 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 CALCOCO2Q13137 446 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 PRR16Q569H4 304 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 RHBDF2Q6PJF5 856 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 ZNF720Q7Z2F6 126 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 CEP57Q86XR8 500 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 SCLT1Q96NL6 688 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 RAD9AQ99638 391 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 TMEM206Q9H813 350 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 EHMT1Q9H9B1 1298 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 GTF3C4Q9UKN8 822 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 ARL2BPQ9Y2Y0 163 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 MYO7AQ13402 2215 aa12.22□□□□□ -0.45
USF1-201ENST00000368019 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 ADGRA3Q8IWK6 1321 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 LINC01553A4QN01 128 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 FSCN2O14926 492 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 SORBS3O60504 671 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 LGR5O75473 907 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 ECEL1O95672 775 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 UBA1P22314 1058 aaKnown RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 CLNS1AP54105 237 aaKnown RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 NR1H3Q13133 447 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 IKBKEQ14164 716 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 SIX1Q15475 284 aaPredicted RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 EPC2Q52LR7 807 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 GJB7Q6PEY0 223 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 GRK7Q8WTQ7 553 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 HLA-CQ95604 372 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 GJA10Q969M2 543 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 SPATA33Q96N06 139 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 NACC1Q96RE7 527 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 PRMT1Q99873 361 aaKnown RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 ELAC2Q9BQ52 826 aaKnown RBP12.21□□□□□ -0.45
USF1-201ENST00000368019 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 TRIM31Q9BZY9 425 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 TRIM7Q9C029 511 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 SEMA4AQ9H3S1 761 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 PPCSQ9HAB8 311 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 RXFP1Q9HBX9 757 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 ARHGEF3Q9NR81 526 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 CTTNBP2NLQ9P2B4 639 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 PRKAG3Q9UGI9 489 aa12.21□□□□□ -0.45
USF1-201ENST00000368019 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 RSPH10B2B2RC85 870 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 E7ENQ6 273 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 FAM86B1E9PN63 330 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 NDC80O14777 642 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 CLIC2O15247 247 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 PSMD10O75832 226 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 ABHD2P08910 425 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 FAM86B2P0C5J1 330 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 RSPH10BP0C881 870 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 POLR2MP0CAP2 368 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 RARAP10276 462 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms