RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 TBCAO75347 108 aaKnown RBP18.06■□□□□ 0.48
MRPL55-217ENST00000366746 KCNA4P22459 653 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 AVPR1AP37288 418 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 ACOT2P49753 483 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 GRSF1Q12849 480 aaKnown RBP eCLIP18.06■□□□□ 0.48
MRPL55-217ENST00000366746 ADALQ6DHV7 355 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 SLFN12LQ6IEE8 588 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 SPPL2BQ8TCT7 592 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 DPP3Q9NY33 737 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 SLC8A2Q9UPR5 921 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 C2CD2Q9Y426 696 aa18.06■□□□□ 0.48
MRPL55-217ENST00000366746 EXTL3O43909 919 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 HAPLN1P10915 354 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-217ENST00000366746 TAF6P49848 677 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 GTF2BQ00403 316 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 AMPD2Q01433 879 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 BFSP1Q12934 665 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 RUNX3Q13761 415 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 AASDHQ4L235 1098 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-217ENST00000366746 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
MRPL55-217ENST00000366746 C12orf50Q8NA57 414 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-217ENST00000366746 GAB3Q8WWW8 586 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 LOXL4Q96JB6 756 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 FAM83CQ9BQN1 747 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 ABI2Q9NYB9 513 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-217ENST00000366746 COL4A2P08572 1712 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 TICRRQ7Z2Z1 1910 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 TPRP12270 2363 aaKnown RBP18.05■□□□□ 0.48
MRPL55-217ENST00000366746 CITO14578 2027 aa18.05■□□□□ 0.48
MRPL55-217ENST00000366746 ANKRD63C9JTQ0 380 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 RPP40O75818 363 aaKnown RBP18.04■□□□□ 0.48
MRPL55-217ENST00000366746 NMT1P30419 496 aaKnown RBP18.04■□□□□ 0.48
MRPL55-217ENST00000366746 HOXC13P31276 330 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 PXNP49023 591 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-217ENST00000366746 MCM6Q14566 821 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 ST3GAL2Q16842 350 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 ERICH6BQ5W0A0 696 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 WSCD1Q658N2 575 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 CC2D1AQ6P1N0 951 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-217ENST00000366746 CACNA2D4Q7Z3S7 1137 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 MAB21L3Q8N8X9 362 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 ARRDC1-AS1Q9H2J1 176 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 EBF3Q9H4W6 596 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 AGO2Q9UKV8 859 aaKnown RBP18.04■□□□□ 0.48
MRPL55-217ENST00000366746 PCDHB5Q9Y5E4 795 aa18.04■□□□□ 0.48
MRPL55-217ENST00000366746 ACACBO00763 2458 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 CCDC163A0A0D9SF12 145 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 KPNA7A9QM74 516 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 TULP1O00294 542 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-217ENST00000366746 CCDC192P0DO97 292 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 DDX6P26196 483 aaKnown RBP eCLIP18.03■□□□□ 0.48
MRPL55-217ENST00000366746 NLRP12P59046 1061 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
MRPL55-217ENST00000366746 ZC2HC1CQ53FD0 456 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-217ENST00000366746 TMEM196Q5HYL7 178 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 MRPS31Q92665 395 aaKnown RBP18.03■□□□□ 0.48
MRPL55-217ENST00000366746 RAD54LQ92698 747 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 USP13Q92995 863 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-217ENST00000366746 BLOC1S4Q9NUP1 217 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 TDP1Q9NUW8 608 aa18.03■□□□□ 0.48
MRPL55-217ENST00000366746 TRDMT1O14717 391 aaKnown RBP18.02■□□□□ 0.48
MRPL55-217ENST00000366746 ZNF806P0C7X5 589 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 PLCG1P19174 1290 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 GJB2P29033 226 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 CACNA1BQ00975 2339 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 TSPY1Q01534 308 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 KARSQ15046 597 aaKnown RBP18.02■□□□□ 0.48
MRPL55-217ENST00000366746 SF3A2Q15428 464 aaKnown RBP18.02■□□□□ 0.48
MRPL55-217ENST00000366746 CCDC6Q16204 474 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 SV2CQ496J9 727 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 TXNDC8Q6A555 127 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 TRIM68Q6AZZ1 485 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 FSTL4Q6MZW2 842 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 PKN3Q6P5Z2 889 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 KRI1Q8N9T8 703 aaKnown RBP18.02■□□□□ 0.48
MRPL55-217ENST00000366746 EXOC4Q96A65 974 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 FIZ1Q96SL8 496 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 CCSER1Q9C0I3 900 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 KIF9Q9HAQ2 790 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 HPS4Q9NQG7 708 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 MAGED2Q9UNF1 606 aaPredicted RBP18.02■□□□□ 0.48
MRPL55-217ENST00000366746 CCL26Q9Y258 94 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 STYXL1Q9Y6J8 313 aa18.02■□□□□ 0.48
MRPL55-217ENST00000366746 SOBPA7XYQ1 873 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 TISP43B9A030 160 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 PRPF40AO75400 957 aaKnown RBP18.01■□□□□ 0.47
MRPL55-217ENST00000366746 IL18RAPO95256 599 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 BMP15O95972 392 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 F11P03951 625 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 CSH1P0DML2 217 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 CSH2P0DML3 217 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 HMGA1P17096 107 aaKnown RBP18.01■□□□□ 0.47
MRPL55-217ENST00000366746 DDIT3P35638 169 aa18.01■□□□□ 0.47
MRPL55-217ENST00000366746 LONP1P36776 959 aaKnown RBP18.01■□□□□ 0.47
MRPL55-217ENST00000366746 PNPLA4P41247 253 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms