RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ASB3Q9Y575 518 aa10□□□□□ -0.81
MRPL55-216ENST00000366744 PTPRJQ12913 1337 aa10□□□□□ -0.81
MRPL55-216ENST00000366744 PATJQ8NI35 1801 aa10□□□□□ -0.81
MRPL55-216ENST00000366744 STX10O60499 249 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 EPB41P11171 864 aaKnown RBP9.99□□□□□ -0.81
MRPL55-216ENST00000366744 EDRF1Q3B7T1 1238 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 ZNF667Q5HYK9 610 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 INTS6LQ5JSJ4 861 aaKnown RBP9.99□□□□□ -0.81
MRPL55-216ENST00000366744 ZNF658Q5TYW1 1059 aaPredicted RBP9.99□□□□□ -0.81
MRPL55-216ENST00000366744 CENPPQ6IPU0 288 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 SPATA2LQ8IUW3 424 aaPredicted RBP9.99□□□□□ -0.81
MRPL55-216ENST00000366744 NPAS3Q8IXF0 933 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 FAM186BQ8IYM0 893 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 TMEM174Q8WUU8 243 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 PBXIP1Q96AQ6 731 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 MYADMQ96S97 322 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 ACBD6Q9BR61 282 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 AVENQ9NQS1 362 aaPredicted RBP9.99□□□□□ -0.81
MRPL55-216ENST00000366744 GDE1Q9NZC3 331 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 DNMT3BQ9UBC3 853 aaKnown RBP9.99□□□□□ -0.81
MRPL55-216ENST00000366744 SIX4Q9UIU6 781 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 DUSP12Q9UNI6 340 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 NUMBLQ9Y6R0 609 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 ATP8B3O60423 1300 aa9.99□□□□□ -0.81
MRPL55-216ENST00000366744 ANAPC1Q9H1A4 1944 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 LRRIQ3A6PVS8 624 aaPredicted RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 CETN3O15182 167 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 MAPK13O15264 365 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 MICAL2O94851 1124 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 SRFP11831 508 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 CEBPBP17676 345 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 COL9A1P20849 921 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 ACAT1P24752 427 aaKnown RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 ANXA13P27216 316 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 CDC25CP30307 473 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 PSMC2P35998 433 aaKnown RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 VAMP7P51809 220 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 UBE2HP62256 183 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 RPL10AP62906 217 aaKnown RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 LRRC63Q05C16 580 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 ADAM9Q13443 819 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 HTR4Q13639 388 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 NCOA4Q13772 614 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 NFIL3Q16649 462 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 WDR72Q3MJ13 1102 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 SMYD4Q8IYR2 804 aaPredicted RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 ATAD1Q8NBU5 361 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 ITFG1Q8TB96 612 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 FEZF2Q8TBJ5 459 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 PSMG2Q969U7 264 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 FAM84AQ96KN4 292 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 TMEM209Q96SK2 561 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 SYT15Q9BQS2 421 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 GPR88Q9GZN0 384 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 ABCB6Q9NP58 842 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 EHD2Q9NZN4 543 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 CDH9Q9ULB4 789 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 SLC27A5Q9Y2P5 690 aa9.98□□□□□ -0.81
MRPL55-216ENST00000366744 KIF26AQ9ULI4 1882 aaPredicted RBP9.98□□□□□ -0.81
MRPL55-216ENST00000366744 BICDL2A1A5D9 508 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 STK25O00506 426 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 IKBKBO14920 756 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 N4BP1O75113 896 aaKnown RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 STAU1O95793 577 aaKnown RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 WARSP23381 471 aaKnown RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 CASP4P49662 377 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 MYL6P60660 151 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 PFKPQ01813 784 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 CYP27A1Q02318 531 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 SNW1Q13573 536 aaKnown RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 SLC5A9Q2M3M2 681 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 SOWAHAQ2M3V2 549 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 DCAF17Q5H9S7 520 aaPredicted RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 SCARA5Q6ZMJ2 495 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 HFE2Q6ZVN8 426 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 ENGASEQ8NFI3 743 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 OR6B3Q8NGW1 331 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 PARD3BQ8TEW8 1205 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 TAF4BQ92750 862 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 FUBP3Q96I24 572 aaKnown RBP eCLIP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 GBP4Q96PP9 640 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 PRRX2Q99811 253 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 KXD1Q9BQD3 176 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 PI4K2AQ9BTU6 479 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 MKNK1Q9BUB5 465 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 MMRN2Q9H8L6 949 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 DMAC2Q9NW81 257 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 CEP72Q9P209 647 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 UXTQ9UBK9 157 aaPredicted RBP9.97□□□□□ -0.81
MRPL55-216ENST00000366744 ZMYM5Q9UJ78 669 aa9.97□□□□□ -0.81
MRPL55-216ENST00000366744 A0A1W2PRU2 124 aa9.96□□□□□ -0.82
MRPL55-216ENST00000366744 A8MXQ7 604 aa9.96□□□□□ -0.82
MRPL55-216ENST00000366744 ANHXE9PGG2 379 aa9.96□□□□□ -0.82
MRPL55-216ENST00000366744 GOLGA6L22H0YM25 854 aa9.96□□□□□ -0.82
MRPL55-216ENST00000366744 DPYSL4O14531 572 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms