RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 HCRTO43612 131 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 EXOC3O60645 756 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 MICAL2O94851 1124 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 RHOBTB3O94955 611 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 NPR3P17342 541 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 ATF6P18850 670 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 TNNI1P19237 187 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 FCARP24071 287 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 ACAT1P24752 427 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 AVPR2P30518 371 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 TSPY1Q01534 308 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 TEAD2Q15562 447 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 CCDC142Q17RM4 750 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 INTS6LQ5JSJ4 861 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 DCP1BQ8IZD4 617 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 TOP6BLQ8N6T0 577 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 TMEM105Q8N8V8 129 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 FLCNQ8NFG4 579 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 SHKBP1Q8TBC3 707 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 SPPL2BQ8TCT7 592 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 C2orf15Q8WU43 125 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 PSMG2Q969U7 264 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 LRRC3Q9BY71 257 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 ZNF334Q9HCZ1 680 aaPredicted RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 WNT16Q9UBV4 365 aa11.13□□□□□ -0.63
YBX3-203ENST00000366286 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
YBX3-203ENST00000366286 MUC6Q6W4X9 2439 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 A0A1W2PRU2 124 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ECI2O75521 394 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 NR3C1P04150 777 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
YBX3-203ENST00000366286 CASP4P49662 377 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 GPC5P78333 572 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 MYL7Q01449 175 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 VEPH1Q14D04 833 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 FAM78AQ5JUQ0 283 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 TANGO2Q6ICL3 276 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 SLC9A9Q8IVB4 645 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ZSWIM3Q96MP5 696 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ACBD6Q9BR61 282 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 PLA2G2FQ9BZM2 168 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 DMAC2Q9NW81 257 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 ASB3Q9Y575 518 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 PCDHB5Q9Y5E4 795 aa11.12□□□□□ -0.63
YBX3-203ENST00000366286 NCANO14594 1321 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 LRRIQ3A6PVS8 624 aaPredicted RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 PDXKO00764 312 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 GABRDO14764 452 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 CALUO43852 315 aaPredicted RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 CST3P01034 146 aaPredicted RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 AOC1P19801 751 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 RFX1P22670 979 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 PCSK1P29120 753 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 LHX1P48742 406 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 TUFMP49411 452 aaKnown RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 GPR15P49685 360 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 NHLH1Q02575 133 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 TCF15Q12870 199 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 PNOCQ13519 176 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 KCNB1Q14721 858 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 STXBP5Q5T5C0 1151 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 DNAJB7Q7Z6W7 309 aaPredicted RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 ITIH5Q86UX2 942 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 STKLD1Q8NE28 680 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 ZSCAN18Q8TBC5 510 aaPredicted RBP11.11□□□□□ -0.63
YBX3-203ENST00000366286 GIPC2Q8TF65 315 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 TMEM174Q8WUU8 243 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 ELSPBP1Q96BH3 223 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 PRRX2Q99811 253 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 SYT15Q9BQS2 421 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 PI4K2AQ9BTU6 479 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 TBC1D17Q9HA65 648 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 MAPK8IP1Q9UQF2 711 aa11.11□□□□□ -0.63
YBX3-203ENST00000366286 GOLGA6L4A6NEF3 574 aa11.1□□□□□ -0.63
YBX3-203ENST00000366286 PI15O43692 258 aa11.1□□□□□ -0.63
YBX3-203ENST00000366286 KIF20AO95235 890 aa11.1□□□□□ -0.63
YBX3-203ENST00000366286 WARSP23381 471 aaKnown RBP11.1□□□□□ -0.63
YBX3-203ENST00000366286 GABRR2P28476 465 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms