RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 TTC7BQ86TV6 843 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 DDX42Q86XP3 938 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 COA7Q96BR5 231 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 FAM136AQ96C01 138 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 FAXDC2Q96IV6 333 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 TEKT5Q96M29 485 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 FCRL4Q96PJ5 515 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 AMBRA1Q9C0C7 1298 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 ARHGEF3Q9NR81 526 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 MRPS18AQ9NVS2 196 aaKnown RBP3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 SERPINB13Q9UIV8 391 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCDHGA9Q9Y5G4 932 aaKnown RBP3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCDHGA8Q9Y5G5 932 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCDHGA7Q9Y5G6 932 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCDHGA6Q9Y5G7 932 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCDHGA3Q9Y5H0 932 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 LRRC14BA6NHZ5 514 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 JTBO76095 146 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 KIF20AO95235 890 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 LATS1O95835 1130 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 PDHA1P08559 390 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 CYP2D6P10635 497 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 JUPP14923 745 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 PHKA1P46020 1223 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 PIK3CGP48736 1102 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SNAPC2Q13487 334 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 PROSER3Q2NL68 480 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SUPT20HL1Q3ZLR7 823 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SLC44A4Q53GD3 710 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 ZNF618Q5T7W0 954 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 VPS53Q5VIR6 699 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SYDE2Q5VT97 1194 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 PRAMEF17Q5VTA0 474 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SLC9A4Q6AI14 798 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 C11orf87Q6NUJ2 197 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 FANCBQ8NB91 859 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 DENND1AQ8TEH3 1009 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 TBC1D5Q92609 795 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 ZBTB9Q96C00 473 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 ZNF48Q96MX3 618 aaPredicted RBP3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 TINAGL1Q9GZM7 467 aaPredicted RBP3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SIK2Q9H0K1 926 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 BHMT2Q9H2M3 363 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 TMX1Q9H3N1 280 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 GPR35Q9HC97 309 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 TRHDEQ9UKU6 1024 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 BTBD3Q9Y2F9 522 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 TBC1D30Q9Y2I9 924 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 RAD54BQ9Y620 910 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 ZNF521Q96K83 1311 aa3.14□□□□□ -1.91
RNU4-42P-201ENST00000364738 SHTN1A0MZ66 631 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 TISP43B9A030 160 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 H0YIZ8 118 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 QSOX1O00391 747 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 PPP6CO00743 305 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 PPM1DO15297 605 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 GCLCP48506 637 aaPredicted RBP3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 ALDH9A1P49189 494 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 AARS2Q5JTZ9 985 aaKnown RBP3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 SLC18B1Q6NT16 456 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 ANKRD16Q6P6B7 361 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 PNMA8AQ86V59 439 aaPredicted RBP3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 FAM109AQ8N4B1 249 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 REPS1Q96D71 796 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 MTMR8Q96EF0 704 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 SH2D3AQ9BRG2 576 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 C1orf43Q9BWL3 253 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 SERHLQ9NQF3 203 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 AGAP1Q9UPQ3 857 aa3.13□□□□□ -1.91
RNU4-42P-201ENST00000364738 M0QYG6 137 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 FZD9O00144 591 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 ZNF213O14771 459 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 MOSPD3O75425 235 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 GNAI2P04899 355 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 IL6RP08887 468 aaPredicted RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 FAM163BP0C2L3 166 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 FTH1P19P0C7X4 201 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 NHLRC4P0CG21 123 aaPredicted RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 PRDX5P30044 214 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 CYP2C18P33260 490 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 TOB1P50616 345 aaPredicted RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 CCT4P50991 539 aaKnown RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 FXR1P51114 621 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 CLCN2P51788 898 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 ADKP55263 362 aaKnown RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 EEFSECP57772 596 aaKnown RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 KRT85P78386 507 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 DSC2Q02487 901 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 TCF15Q12870 199 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 KIF22Q14807 665 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCBP2Q15366 365 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 CEP78Q5JTW2 689 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 EFCAB2Q5VUJ9 269 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 SLC2A7Q6PXP3 512 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 TMEM108Q6UXF1 575 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 PPP1R32Q7Z5V6 425 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 C3orf20Q8ND61 904 aa3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 TNPO1Q92973 898 aaKnown RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 QTRT1Q9BXR0 403 aaKnown RBP3.12□□□□□ -1.91
RNU4-42P-201ENST00000364738 FEZ2Q9UHY8 353 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms