RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 AIPL1Q9NZN9 384 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 ZFP69BQ9UJL9 534 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 MYPNQ86TC9 1320 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 CYB561D2O14569 222 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 ANP32DO95626 131 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 INSRRP14616 1297 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 MRPS31Q92665 395 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 TGS1Q96RS0 853 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 WWP1Q9H0M0 922 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 RANBP17Q9H2T7 1088 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 PTPRAP18433 802 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 FDFT1P37268 417 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 ETFBP38117 255 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 ZNF280DQ6N043 979 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 JAMLQ86YT9 394 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 PTPRN2Q92932 1015 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 SLC13A1Q9BZW2 595 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 FOXN3O00409 490 aaPredicted RBP14.08□□□□□ -0.15
LDB3-202ENST00000361373 RGS4P49798 205 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 CYP4A22Q5TCH4 519 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 THEMIS2Q5TEJ8 643 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 CCNJLQ8IV13 435 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 KLHL11Q9NVR0 708 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 ARHGEF38Q9NXL2 777 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 GPRC5DQ9NZD1 345 aa14.08□□□□□ -0.15
LDB3-202ENST00000361373 PSMC3IPQ9P2W1 217 aaPredicted RBP14.08□□□□□ -0.15
LDB3-202ENST00000361373 GRAP2O75791 330 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 URODP06132 367 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 MAP4P27816 1152 aaKnown RBP14.08□□□□□ -0.16
LDB3-202ENST00000361373 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
LDB3-202ENST00000361373 GRIK4Q16099 956 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
LDB3-202ENST00000361373 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ZNF507Q8TCN5 953 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 SGSM3Q96HU1 749 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 AGAP3Q96P47 875 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 SLC4A9Q96Q91 983 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 TRABDQ9H4I3 376 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 WDCPQ9H6R7 721 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 DDIT4Q9NX09 232 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 PTK6Q13882 451 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 MTFR1Q15390 333 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 OTOP1Q7RTM1 612 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 RIOX2Q8IUF8 465 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ADGRF2Q8IZF7 708 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 CCDC138Q96M89 665 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ERP44Q9BS26 406 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 GLIS2Q9BZE0 524 aaPredicted RBP14.08□□□□□ -0.16
LDB3-202ENST00000361373 PCDHGB4Q9UN71 923 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 A0A087WZ62 844 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 CABYRO75952 493 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 GFAPP14136 432 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 EPHB2P29323 1055 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ERVK-9P63128 1117 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ERVK-24P63145 666 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 FKBP1BP68106 108 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ZNF200P98182 395 aaPredicted RBP14.08□□□□□ -0.16
LDB3-202ENST00000361373 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.16
LDB3-202ENST00000361373 PTK2BQ14289 1009 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 RABGAP1LQ5R372 815 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ANGPTL8Q6UXH0 198 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 FDXACB1Q9BRP7 624 aaPredicted RBP14.08□□□□□ -0.16
LDB3-202ENST00000361373 WDR18Q9BV38 432 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 RRN3Q9NYV6 651 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 KLK14Q9P0G3 267 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ADGRB2O60241 1585 aa14.08□□□□□ -0.16
LDB3-202ENST00000361373 ACO1P21399 889 aaKnown RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 MCL1Q07820 350 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 EFTUD2Q15029 972 aaKnown RBP eCLIP14.07□□□□□ -0.16
LDB3-202ENST00000361373 MMGT1Q8N4V1 131 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 CDK5RAP1Q96SZ6 601 aaKnown RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 GOLPH3Q9H4A6 298 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 F5H423 210 aaPredicted RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 DIAPH2O60879 1101 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 CYP11B1P15538 503 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 ADORA2AP29274 412 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 RHBDL3P58872 404 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 TAF11Q15544 211 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 KRT80Q6KB66 452 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 CDR2LQ86X02 465 aaPredicted RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 MFN1Q8IWA4 741 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 TPCN2Q8NHX9 752 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 RRAGCQ9HB90 399 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 KDM1AO60341 852 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 TLR2O60603 784 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 MSCO60682 206 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 VTNP04004 478 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 SERPINB4P48594 390 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 ZNF177Q13360 481 aaPredicted RBP14.07□□□□□ -0.16
LDB3-202ENST00000361373 PPIL6Q8IXY8 311 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 UCMAQ8WVF2 138 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 ZSWIM1Q9BR11 485 aa14.07□□□□□ -0.16
LDB3-202ENST00000361373 ACKR2O00590 384 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms