RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 CD58P19256 250 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 HOXA13P31271 388 aaPredicted RBP12.88□□□□□ -0.35
RBM39-203ENST00000361162 FMO1Q01740 532 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 KDSRQ06136 332 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 NFIAQ12857 509 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
RBM39-203ENST00000361162 ALYREFQ86V81 257 aaKnown RBP12.88□□□□□ -0.35
RBM39-203ENST00000361162 FAM178BQ8IXR5 827 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 TCP10LQ8TDR4 215 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 TMEM120AQ9BXJ8 343 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 VCX3BQ9H321 246 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 EBF3Q9H4W6 596 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 USTQ9Y2C2 406 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 GOLGA8IPA6NC78 632 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 GOLGA8JA6NMD2 632 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 PRPF4O43172 522 aaKnown RBP eCLIP12.88□□□□□ -0.35
RBM39-203ENST00000361162 TYROBPO43914 113 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 ENO1P06733 434 aaKnown RBP12.88□□□□□ -0.35
RBM39-203ENST00000361162 GAD2Q05329 585 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 HIC2Q96JB3 615 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 ATXN10Q9UBB4 475 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 NOCTQ9UK39 431 aaKnown RBP12.88□□□□□ -0.35
RBM39-203ENST00000361162 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 PHF24Q9UPV7 400 aa12.88□□□□□ -0.35
RBM39-203ENST00000361162 FAM237BA0A1B0GVD1 139 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ZWINTO95229 277 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 KRT10P13645 584 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ANPEPP15144 967 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
RBM39-203ENST00000361162 PSMC4P43686 418 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 TMEM62Q0P6H9 643 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ATP13A4Q4VNC1 1196 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
RBM39-203ENST00000361162 DCAF15Q66K64 600 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ZNF720Q7Z2F6 126 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 SLCO2A1Q92959 643 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 KREMEN1Q96MU8 473 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 THTPAQ9BU02 230 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 NMUR2Q9GZQ4 415 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 CHMP2BQ9UQN3 213 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 MSH4O15457 936 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 TPP2P29144 1249 aaPredicted RBP12.87□□□□□ -0.35
RBM39-203ENST00000361162 GRIA2P42262 883 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 BPIFB4P59827 614 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 PDIA2Q13087 525 aaKnown RBP12.87□□□□□ -0.35
RBM39-203ENST00000361162 RASA3Q14644 834 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 SHROOM1Q2M3G4 852 aaPredicted RBP12.87□□□□□ -0.35
RBM39-203ENST00000361162 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
RBM39-203ENST00000361162 SATL1Q86VE3 508 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 CPA5Q8WXQ8 436 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ECSITQ9BQ95 431 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 TRIM55Q9BYV6 548 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 TDRD3Q9H7E2 651 aaKnown RBP12.87□□□□□ -0.35
RBM39-203ENST00000361162 MANSC1Q9H8J5 431 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ZNF212Q9UDV6 495 aa12.87□□□□□ -0.35
RBM39-203ENST00000361162 ZSCAN9O15535 394 aaPredicted RBP12.86□□□□□ -0.35
RBM39-203ENST00000361162 PFDN1O60925 122 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 PGM3O95394 542 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 CYP1A2P05177 515 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 MYL2P10916 166 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
RBM39-203ENST00000361162 SSTR1P30872 391 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 ARL4CP56559 192 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 DSG1Q02413 1049 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 RIPOR1Q6ZS17 1223 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 RGS9BPQ6ZS82 235 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 CCDC127Q96BQ5 260 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 CBWD1Q9BRT8 395 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 PLVAPQ9BX97 442 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 KCNK13Q9HB14 408 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
RBM39-203ENST00000361162 DDTLA6NHG4 134 aaPredicted RBP12.86□□□□□ -0.35
RBM39-203ENST00000361162 FCHO1O14526 889 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 IFNB1P01574 187 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
RBM39-203ENST00000361162 CAV1Q03135 178 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 LSAMPQ13449 338 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 RAPH1Q70E73 1250 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 CCDC89Q8N998 374 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 PLEKHO2Q8TD55 490 aa12.86□□□□□ -0.35
RBM39-203ENST00000361162 GRK7Q8WTQ7 553 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms