RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SLC4A1P02730 911 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 PTDSS1P48651 473 aaKnown RBP14.57□□□□□ -0.08
SMC5-201ENST00000361138 DUOXA2Q1HG44 320 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 TTC33Q6PID6 262 aaPredicted RBP14.57□□□□□ -0.08
SMC5-201ENST00000361138 USP6NLQ92738 828 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 CATSPER2Q96P56 530 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 KIF17Q9P2E2 1029 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 PEX5P50542 639 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 NSUN2Q08J23 767 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMC5-201ENST00000361138 RNF135Q8IUD6 432 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 SKA2Q8WVK7 121 aaPredicted RBP14.57□□□□□ -0.08
SMC5-201ENST00000361138 CACYBPQ9HB71 228 aaKnown RBP14.57□□□□□ -0.08
SMC5-201ENST00000361138 ARHGEF9O43307 516 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 WFS1O76024 890 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 HLA-DRAP01903 254 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 ACCSLQ4AC99 568 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 FBXO33Q7Z6M2 555 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 TASP1Q9H6P5 420 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 CTNNAL1Q9UBT7 734 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 ATP9BO43861 1147 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 ZNF189O75820 626 aaPredicted RBP14.57□□□□□ -0.08
SMC5-201ENST00000361138 CLEC10AQ8IUN9 316 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 SIKE1Q9BRV8 207 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 NARFQ9UHQ1 456 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 DDX3XO00571 662 aaKnown RBP eCLIP14.56□□□□□ -0.089e-10■□□□□ 11.3
SMC5-201ENST00000361138 PYGMP11217 842 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 ACOT2P49753 483 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 ROR2Q01974 943 aaKnown RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 NCOA4Q13772 614 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 SLC25A41Q8N5S1 370 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 MMADHCQ9H3L0 296 aaPredicted RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 SNX2O60749 519 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 CASP7P55210 303 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 GADL1Q6ZQY3 521 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 ZNF75CPQ92670 426 aaPredicted RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 BEGAINQ9BUH8 593 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 FRMD8Q9BZ67 464 aaPredicted RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 KIAA1683Q9H0B3 1180 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 GSTT1P30711 240 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 TMEM119Q4V9L6 283 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 PNMA5Q96PV4 448 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 DDX28Q9NUL7 540 aaKnown RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 AP4S1Q9Y587 144 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 NUDT17P0C025 328 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 RARAP10276 462 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 XRCC4Q13426 336 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 AUHQ13825 339 aaKnown RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 SLC47A2Q86VL8 602 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 KAT2BQ92831 832 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 APOA1P02647 267 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 THRAP10827 490 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 SERPINB5P36952 375 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 ACTR2P61160 394 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 OASLQ15646 514 aaKnown RBP14.56□□□□□ -0.08
SMC5-201ENST00000361138 WLSQ5T9L3 541 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 PID1Q7Z2X4 250 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 ADGRA1Q86SQ6 560 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 SPATA20Q8TB22 786 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 MRGBPQ9NV56 204 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 DCDC2Q9UHG0 476 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 PCDHA3Q9Y5H8 950 aa14.56□□□□□ -0.08
SMC5-201ENST00000361138 TBC1D4O60343 1298 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 GLRA3O75311 464 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 ATICP31939 592 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 TERB1Q8NA31 727 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 FLAD1Q8NFF5 587 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 ZFRQ96KR1 1074 aaKnown RBP14.55□□□□□ -0.08
SMC5-201ENST00000361138 AGPSO00116 658 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 MSH4O15457 936 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 ATP6V1C1P21283 382 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 CDK16Q00536 496 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 PTK6Q13882 451 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 TFDP3Q5H9I0 405 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 EFHC2Q5JST6 749 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 ZNF786Q8N393 782 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 H0Y626 953 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 FCHO1O14526 889 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 TRIM16O95361 564 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 KRT75O95678 551 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 SPRP35270 261 aaPredicted RBP14.55□□□□□ -0.08
SMC5-201ENST00000361138 TMCO5AQ8N6Q1 288 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 EXD1Q8NHP7 514 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 PCDHA10Q9Y5I2 948 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 RNF225M0QZC1 329 aaPredicted RBP14.55□□□□□ -0.08
SMC5-201ENST00000361138 RPS6KA4O75676 772 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 RBP3P10745 1247 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 GTF2H1P32780 548 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 MRPS15P82914 257 aaKnown RBP14.55□□□□□ -0.08
SMC5-201ENST00000361138 SF3B3Q15393 1217 aaKnown RBP14.55□□□□□ -0.08
SMC5-201ENST00000361138 CLEC16AQ2KHT3 1053 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 PDPK2PQ6A1A2 396 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 BNC2Q6ZN30 1099 aaPredicted RBP14.55□□□□□ -0.08
SMC5-201ENST00000361138 IQCKQ8N0W5 287 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 TTC39CQ8N584 583 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 FAM167AQ96KS9 214 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 DACH2Q96NX9 599 aa14.55□□□□□ -0.08
SMC5-201ENST00000361138 DNAJC16Q9Y2G8 782 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms