RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 NUP210Q8TEM1 1887 aaPredicted RBP15.01□□□□□ -0.01
VPS29-201ENST00000360579 LAMA1P25391 3075 aa15.01□□□□□ -0.01
VPS29-201ENST00000360579 LACTBL1A8MY62 500 aa15□□□□□ -0.01
VPS29-201ENST00000360579 RNF40O75150 1001 aa15□□□□□ -0.01
VPS29-201ENST00000360579 CYP11A1P05108 521 aa15□□□□□ -0.01
VPS29-201ENST00000360579 NOVA1P51513 510 aaKnown RBP15□□□□□ -0.01
VPS29-201ENST00000360579 NEK4P51957 841 aa15□□□□□ -0.01
VPS29-201ENST00000360579 SLC39A12Q504Y0 691 aa15□□□□□ -0.01
VPS29-201ENST00000360579 SPATA1Q5VX52 437 aa15□□□□□ -0.01
VPS29-201ENST00000360579 CC2D1AQ6P1N0 951 aaPredicted RBP15□□□□□ -0.01
VPS29-201ENST00000360579 UNQ6494/PRO21346Q6UXR6 183 aa15□□□□□ -0.01
VPS29-201ENST00000360579 C11orf74Q86VG3 221 aa15□□□□□ -0.01
VPS29-201ENST00000360579 FBXO18Q8NFZ0 1043 aa15□□□□□ -0.01
VPS29-201ENST00000360579 LPIN3Q9BQK8 851 aa15□□□□□ -0.01
VPS29-201ENST00000360579 LLPHQ9BRT6 129 aaKnown RBP15□□□□□ -0.01
VPS29-201ENST00000360579 EDEM2Q9BV94 578 aa15□□□□□ -0.01
VPS29-201ENST00000360579 RPF1Q9H9Y2 349 aaKnown RBP15□□□□□ -0.01
VPS29-201ENST00000360579 IL21Q9HBE4 155 aa15□□□□□ -0.01
VPS29-201ENST00000360579 SH2B1Q9NRF2 756 aaPredicted RBP15□□□□□ -0.01
VPS29-201ENST00000360579 LARSQ9P2J5 1176 aaKnown RBP15□□□□□ -0.01
VPS29-201ENST00000360579 SDK1Q7Z5N4 2213 aa15□□□□□ -0.01
VPS29-201ENST00000360579 SPAG17Q6Q759 2223 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 CAVIN2O95810 425 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 ADRB2P07550 413 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 ATF6P18850 670 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 PRPHP41219 470 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 LIG4P49917 911 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 PDGFRLQ15198 375 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 ENOX2Q16206 610 aaKnown RBP14.99□□□□□ -0.01
VPS29-201ENST00000360579 DTHD1Q6ZMT9 781 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 SYT13Q7L8C5 426 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 METTL23Q86XA0 190 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 THEM5Q8N1Q8 247 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 OR10T2Q8NGX3 314 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 CCDC26Q8TAB7 109 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 SPPL2BQ8TCT7 592 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 KCNN1Q92952 543 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 ACDQ96AP0 544 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 ZCWPW1Q9H0M4 648 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 SMG9Q9H0W8 520 aaKnown RBP14.99□□□□□ -0.01
VPS29-201ENST00000360579 DUSP15Q9H1R2 295 aaPredicted RBP14.99□□□□□ -0.01
VPS29-201ENST00000360579 SMOC1Q9H4F8 434 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 EBF3Q9H4W6 596 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 HPS4Q9NQG7 708 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 TDP1Q9NUW8 608 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 EBF1Q9UH73 591 aa14.99□□□□□ -0.01
VPS29-201ENST00000360579 BAHCC1Q9P281 2608 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 ZZEF1O43149 2961 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 TMEM8BA6NDV4 472 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 PP2D1A8MPX8 630 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 HNRNPDLO14979 420 aaKnown RBP14.98□□□□□ -0.01
VPS29-201ENST00000360579 OGTO15294 1046 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
VPS29-201ENST00000360579 APBB3O95704 486 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 EGFP01133 1207 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 TNFSF9P41273 254 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 GUCY2FP51841 1108 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 HMGN5P82970 282 aaKnown RBP14.98□□□□□ -0.01
VPS29-201ENST00000360579 CREB5Q02930 508 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 RAD51AP2Q09MP3 1159 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 NBR1Q14596 966 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 C9orf57Q5W0N0 161 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 KCNK18Q7Z418 384 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 TMEM130Q8N3G9 435 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 SYT2Q8N9I0 419 aaPredicted RBP14.98□□□□□ -0.01
VPS29-201ENST00000360579 KDF1Q8NAX2 398 aaPredicted RBP14.98□□□□□ -0.01
VPS29-201ENST00000360579 HHIPQ96QV1 700 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 P2RY13Q9BPV8 354 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 HAPLN2Q9GZV7 340 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 DERAQ9Y315 318 aa14.98□□□□□ -0.01
VPS29-201ENST00000360579 BCLAF3A2AJT9 711 aaKnown RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 C4orf47A7E2U8 309 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 PIRO00625 290 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 PPEF2O14830 753 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 EIF5BO60841 1220 aaKnown RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 HAPLN1P10915 354 aaPredicted RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 CDC25AP30304 524 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 NCKAP1LP55160 1127 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 ZNF252P-AS1Q0IIN9 211 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 ST3GAL1Q11201 340 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 ZNF268Q14587 947 aaPredicted RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 ZRSR1Q15695 479 aaKnown RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 HYIQ5T013 277 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 TCEAL6Q6IPX3 200 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 DCP1BQ8IZD4 617 aaKnown RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 CPA6Q8N4T0 437 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 MAB21L3Q8N8X9 362 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 RPLP0P6Q8NHW5 317 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 GIPC2Q8TF65 315 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 MRPS31Q92665 395 aaKnown RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 USP13Q92995 863 aaPredicted RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 TCEAL3Q969E4 200 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 CHFRQ96EP1 664 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 RALYQ9UKM9 306 aaKnown RBP14.97□□□□□ -0.01
VPS29-201ENST00000360579 ZMIZ1Q9ULJ6 1067 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
VPS29-201ENST00000360579 SPEGQ15772 3267 aa14.96□□□□□ -0.01
VPS29-201ENST00000360579 OTOL1A6NHN0 477 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms