RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 DDX53Q86TM3 631 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TRIM48Q8IWZ4 208 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ENKURQ8TC29 256 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM20AQ96MK3 541 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 PDE9AO76083 593 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ITIH2P19823 946 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ITGAXP20702 1163 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 GRK3P35626 688 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ATP12AP54707 1039 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 AKIRIN2Q53H80 203 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 NEK10Q6ZWH5 1172 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 CCDC126Q96EE4 140 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TINF2Q9BSI4 451 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TUBA8Q9NY65 449 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 COPG2Q9UBF2 871 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TPST1O60507 370 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 DARSP14868 501 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 PWP1Q13610 501 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 SYCP2LQ5T4T6 812 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TMEM51Q9NW97 253 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 UBA2Q9UBT2 640 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ZNF24P17028 368 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 SCNN1DP51172 638 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 BTN2A1Q7KYR7 527 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 LAMC1P11047 1609 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 GPATCH8Q9UKJ3 1502 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 AKR1D1P51857 326 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 RCAN1P53805 252 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 STX5Q13190 355 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 MMRN1Q13201 1228 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 PTK6Q13882 451 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 SNX13Q9Y5W8 968 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 CENPXA8MT69 81 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 FYNP06241 537 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 GNA15P30679 374 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 GCLMP48507 274 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 KCNK10P57789 538 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 CTTNQ14247 550 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 UXS1Q8NBZ7 420 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 BTN3A3O00478 584 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 PRPF3O43395 683 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM58BPP0C7Q3 252 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 ATP8B4Q8TF62 1192 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 DCUN1D5Q9BTE7 237 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 LATS2Q9NRM7 1088 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 ASXL2Q76L83 1435 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 ATP9BO43861 1147 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 MED26O95402 600 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 MAPK1P28482 360 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 CATSPERBQ9H7T0 1116 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 R3HDM2Q9Y2K5 976 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 RGS20O76081 388 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 SLC16A1P53985 500 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 TPI1P60174 286 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 GSTA3Q16772 222 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 CYP4Z1Q86W10 505 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 FAR2Q96K12 515 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 ECSITQ9BQ95 431 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 FLT1P17948 1338 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 IFNA14P01570 189 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 C3orf62Q6ZUJ4 267 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 HAUS6Q7Z4H7 955 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 ADGRA2Q96PE1 1338 aa13.73□□□□□ -0.21
SRGAP3-201ENST00000360413 RAD51CO43502 376 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 IFNAR1P17181 557 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 ACTR2P61160 394 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CCZ1BP86790 482 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 NFIL3Q16649 462 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 NLRP10Q86W26 655 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 LRRC34Q8IZ02 419 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 KRT20P35900 424 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 PPP3CCP48454 512 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CHRNDQ07001 517 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 ARHGAP15Q53QZ3 475 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SERHL2Q9H4I8 314 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SERHLQ9NQF3 203 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 PKP3Q9Y446 797 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 ALOX12P18054 663 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 FLT3P36888 993 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 WDR48Q8TAF3 677 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms