RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 C4BPAP04003 597 aaKnown RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 CFHP08603 1231 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 RBP3P10745 1247 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 TAP1Q03518 808 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 SNCBQ16143 134 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 FASTKD5Q7L8L6 764 aaKnown RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 HPDLQ96IR7 371 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 MED10Q9BTT4 135 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 FAM129AQ9BZQ8 928 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 HAUS2Q9NVX0 235 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 BTBD7Q9P203 1132 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 ETS1P14921 441 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 SMAD1Q15797 465 aaKnown RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 EEF1DP3Q658K8 133 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 SPOCD1Q6ZMY3 1216 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 NME8Q8N427 588 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.78□□□□□ -0.52
SSU72-202ENST00000359060 PPP1R13LQ8WUF5 828 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 TRABDQ9H4I3 376 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 LRRC19Q9H756 370 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 RNF19AQ9NV58 838 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 PRMT7Q9NVM4 692 aaPredicted RBP11.78□□□□□ -0.52
SSU72-202ENST00000359060 C10orf71Q711Q0 1435 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 TROVE2P10155 538 aaKnown RBP eCLIP11.78□□□□□ -0.52
SSU72-202ENST00000359060 INSRRP14616 1297 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 SDC4P31431 198 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 MXRA7P84157 204 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 SPARCL1Q14515 664 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 GPR162Q16538 588 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 FAM47CQ5HY64 1035 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 FAM71DQ8N9W8 422 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 ACTL9Q8TC94 416 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 TTC25Q96NG3 672 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 STRA6Q9BX79 667 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 SNX25Q9H3E2 840 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 TTLL3Q9Y4R7 772 aa11.78□□□□□ -0.52
SSU72-202ENST00000359060 SCN9AQ15858 1988 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 O00370 1275 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 RGS20O76081 388 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 ADORA2BP29275 332 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 PSMC4P43686 418 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 BCAR1P56945 870 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 OTUD4Q01804 1114 aaKnown RBP11.77□□□□□ -0.52
SSU72-202ENST00000359060 TFDP2Q14188 446 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 TFDP3Q5H9I0 405 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 GLRA4Q5JXX5 417 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 SPATA18Q8TC71 538 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 RNF34Q969K3 372 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 PGM2Q96G03 612 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 SERPINB12Q96P63 405 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 GRIN2DO15399 1336 aa11.77□□□□□ -0.52
SSU72-202ENST00000359060 FOXO6A8MYZ6 492 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 CAPN9O14815 690 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 PDGFRBP09619 1106 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 ZNF286BP0CG31 522 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 PTGIRP43119 386 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 DPY19L2P1Q6NXN4 242 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 ZNF449Q6P9G9 518 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 CCNYQ8ND76 341 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 EP400Q96L91 3159 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 ADAMTSL1Q8N6G6 1762 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 CYP2C8P10632 490 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 AUHQ13825 339 aaKnown RBP11.77□□□□□ -0.53
SSU72-202ENST00000359060 AMHR2Q16671 573 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 LGSNQ5TDP6 509 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 PACS2Q86VP3 889 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 GPC2Q8N158 579 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 VCPIP1Q96JH7 1222 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 NINJ2Q9NZG7 142 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 GRHL1Q9NZI5 618 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 MAGED2Q9UNF1 606 aaPredicted RBP11.77□□□□□ -0.53
SSU72-202ENST00000359060 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
SSU72-202ENST00000359060 THSD7AQ9UPZ6 1657 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 A8MXQ7 604 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 QPCTQ16769 361 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 DENND1BQ6P3S1 775 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ART4Q93070 314 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ACKR2O00590 384 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ASAP2O43150 1006 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 GAS2O43903 313 aaKnown RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms