RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SYNJ2BP-COX16A0A087WUM0 186 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 PYGBP11216 843 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SAT1P21673 171 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 NLRP11P59045 1033 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 GAD2Q05329 585 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 MGAT5Q09328 741 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 RNF220Q5VTB9 566 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 RGS9BPQ6ZS82 235 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 CDAN1Q8IWY9 1227 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SCG3Q8WXD2 468 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SLC7A3Q8WY07 619 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 FGD4Q96M96 766 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SH3GL3Q99963 347 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM109Q9BVC6 243 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SLC5A4Q9NY91 659 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 COX16Q9P0S2 106 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 PCDHA10Q9Y5I2 948 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 LRP5O75197 1615 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 hCG_2014768A0A024R1R8 64 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 POLRMTO00411 1230 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 ZWINTO95229 277 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 RBP3P10745 1247 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 DSG3P32926 999 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 VHLP40337 213 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 ATXN3P54252 364 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 MRPS35P82673 323 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 CUL2Q13617 745 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 SLC15A2Q16348 729 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 KLHL38Q2WGJ6 581 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 GRAMD1BQ3KR37 738 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 STRIP1Q5VSL9 837 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 C15orf52Q6ZUT6 534 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 SDCCAG8Q86SQ7 713 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 ZCCHC9Q8N567 271 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 PSPC1Q8WXF1 523 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 MASTLQ96GX5 879 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 PPP1R36Q96LQ0 422 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 DCLRE1BQ9H816 532 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 IFT122Q9HBG6 1241 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 PAPOLBQ9NRJ5 636 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 RAB6BQ9NRW1 208 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 PCMTD2Q9NV79 361 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 ARL8BQ9NVJ2 186 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 SENP1Q9P0U3 644 aa6.9□□□□□ -1.3
CSDE1-203ENST00000358528 GOLGB1Q14789 3259 aaKnown RBP6.9□□□□□ -1.3
CSDE1-203ENST00000358528 LOC100653049A0A140TA62 436 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 SPDYE5A6NIY4 337 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 TRIM49D1C9J1S8 452 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 SPECC1L-ADORA2AF8WAN1 911 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 EDF1O60869 148 aaKnown RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 KRT34O76011 436 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 APRTP07741 180 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 ADSSP30520 456 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 MAMLD1Q13495 774 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 MAPK6Q16659 721 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 KHDC1Q4VXA5 237 aaKnown RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 LGSNQ5TDP6 509 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 OR6B2Q6IFH4 312 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 DSTYKQ6XUX3 929 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 ENOSF1Q7L5Y1 443 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 NUDCD3Q8IVD9 361 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 NLGN1Q8N2Q7 840 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 SLC26A7Q8TE54 656 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 ATXN7L3BQ96GX2 97 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 FAXDC2Q96IV6 333 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 FIZ1Q96SL8 496 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 APOL6Q9BWW8 343 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 AGO4Q9HCK5 861 aaKnown RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 FEM1BQ9UK73 627 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 PLIN4Q96Q06 1357 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 FAM237BA0A1B0GVD1 139 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 MEI4A8MW99 385 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 INO80B-WBP1J3KQ70 363 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 PSTPIP1O43586 416 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 LMNAP02545 664 aaKnown RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 KRT3P12035 628 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 PSEN1P49768 467 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 JAK3P52333 1124 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 CDH6P55285 790 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 KRT76Q01546 638 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 PDK4Q16654 411 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 CYP1B1Q16678 543 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 MROH9Q5TGP6 573 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 TLDC1Q6P9B6 456 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 ZCCHC23Q6ZST2 131 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 RIBC1Q8N443 379 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 EXD1Q8NHP7 514 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 SPATA18Q8TC71 538 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 UCMAQ8WVF2 138 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF606Q8WXB4 792 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 DDX27Q96GQ7 796 aaKnown RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 MECRQ9BV79 373 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 INO80BQ9C086 356 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-203ENST00000358528 RNF146Q9NTX7 359 aa6.9□□□□□ -1.31
CSDE1-203ENST00000358528 SEPT10Q9P0V9 454 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms