RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ARPINQ7Z6K5 226 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 AHI1Q8N157 1196 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DIS3LQ8TF46 1054 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 MTMR9Q96QG7 549 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 EPAS1Q99814 870 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SEMA6BQ9H3T3 888 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TAS2R1Q9NYW7 299 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 GPR75-ASB3A0A0A6YYF3 556 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ZBED1O96006 694 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TTLL12Q14166 644 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TIMM50Q3ZCQ8 353 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 IRF2BP2Q7Z5L9 587 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PATL1Q86TB9 770 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NAT14Q8WUY8 206 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FAM161BQ96MY7 647 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ASB3Q9Y575 518 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ANGPT2O15123 496 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ADRA2BP18089 450 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TPP2P29144 1249 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ACADSBP45954 432 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PDK1Q15118 436 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 Q4G0T1 1027 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SFRP1Q8N474 314 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C7orf43Q8WVR3 580 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ABTB1Q969K4 478 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SGF29Q96ES7 293 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SENP2Q9HC62 589 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PRR36Q9H6K5 1346 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 KLF11O14901 512 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ATF7P17544 494 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CCNHP51946 323 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CASP7P55210 303 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 GOLGA8FQ08AF8 430 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 EFTUD2Q15029 972 aaKnown RBP eCLIP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC8EQ6NSJ5 796 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 GLYCTKQ8IVS8 523 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SAYSD1Q9NPB0 183 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DCTN4Q9UJW0 460 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 P4HBP07237 508 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 COMTP21964 271 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 GJA8P48165 433 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ERVK-9P63128 1117 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FAM91A1Q658Y4 838 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DARS2Q6PI48 645 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ZBTB8OSQ8IWT0 167 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 GRAMD1CQ8IYS0 662 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TSPEARQ8WU66 669 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ATP11BQ9Y2G3 1177 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 F8W031 263 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TIMM44O43615 452 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TAC1P20366 129 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CHRNDQ07001 517 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM119Q4V9L6 283 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 LVRNQ6Q4G3 990 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PACRGLQ8N7B6 248 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CPNE1Q99829 537 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 UBA2Q9UBT2 640 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PHF11Q9UIL8 331 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 VPS9D1Q9Y2B5 631 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 UMODL1Q5DID0 1318 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CENPBD1B2RD01 187 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 C21orf59P57076 290 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SLC26A7Q8TE54 656 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 AZI2Q9H6S1 392 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SLC9A2Q9UBY0 812 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RNF103-CHMP3A0A140T963 221 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 A6NHS1 94 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 K7ERI5 159 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 POLBP06746 335 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 LPCAT2Q7L5N7 544 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 POLNQ7Z5Q5 900 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GPR141Q7Z602 305 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RBM15BQ8NDT2 890 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RIN2Q8WYP3 895 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PAWRQ96IZ0 340 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF577Q9BSK1 485 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 NMRK1Q9NWW6 199 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RBM47A0AV96 593 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 FSCN2O14926 492 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CYP2C8P10632 490 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CDH3P22223 829 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PSTKQ8IV42 348 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ZC3H3Q8IXZ2 948 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SERPINA10Q9UK55 444 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 MAPRE3Q9UPY8 281 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DIP2AQ14689 1571 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGAP23Q9P227 1491 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ISPDA4D126 451 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PIK3CAP42336 1068 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PPP2R5DQ14738 602 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PDIA6Q15084 440 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 OXER1Q8TDS5 423 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PPWD1Q96BP3 646 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms