RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GPM6BQ13491 265 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 PPFIBP1Q86W92 1011 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 RBBP8NLQ8NC74 664 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-202ENST00000357475 JAKMIP2Q96AA8 810 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 FAM81BQ96LP2 452 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 H3BNC9 293 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 OR4Q2P0C623 313 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 CLCN1P35523 988 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 ACOT1Q86TX2 421 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 FAM71AQ8IYT1 594 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 SLC4A11Q8NBS3 891 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 GDPD5Q8WTR4 605 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 EDEM3Q9BZQ6 932 aa27.08■■□□□ 1.93
SSBP3-202ENST00000357475 ADAM12O43184 909 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 IRS1P35568 1242 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 SOX5P35711 763 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 LHX1P48742 406 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 TRIM14Q14142 442 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 ARID5BQ14865 1188 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 CTXN3Q4LDR2 81 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 KIAA1841Q6NSI8 718 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 LZTS1Q9Y250 596 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 LUC7L2Q9Y383 392 aaKnown RBP27.07■■□□□ 1.92
SSBP3-202ENST00000357475 DAAM1Q9Y4D1 1078 aa27.07■■□□□ 1.92
SSBP3-202ENST00000357475 ARHGEF37A1IGU5 675 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 TBC1D4O60343 1298 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 MFAP3LO75121 409 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 FAM163BP0C2L3 166 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 CTSAP10619 480 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 KRT9P35527 623 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 YWHAEP62258 255 aaKnown RBP27.06■■□□□ 1.92
SSBP3-202ENST00000357475 ZBED6P86452 979 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 ARID5AQ03989 594 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 PSMD5Q16401 504 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 C12orf29Q8N999 325 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 PIK3R5Q8WYR1 880 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 TCF25Q9BQ70 676 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 CRTAC1Q9NQ79 661 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 MYO7AQ13402 2215 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 LILRB3O75022 631 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 URODP06132 367 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 STAT1P42224 750 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 PTPN14Q15678 1187 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 LRRTM3Q86VH5 581 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 SLC47A2Q86VL8 602 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 UNC93AQ86WB7 457 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 TC2NQ8N9U0 490 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 SPATA18Q8TC71 538 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 TMEM176AQ96HP8 235 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 SYT15Q9BQS2 421 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 ZSWIM1Q9BR11 485 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 NT5C1AQ9BXI3 368 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 TMLHEQ9NVH6 421 aa27.06■■□□□ 1.92
SSBP3-202ENST00000357475 PUF60Q9UHX1 559 aaKnown RBP27.06■■□□□ 1.92
SSBP3-202ENST00000357475 MYO9BQ13459 2157 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 SZT2Q5T011 3432 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 MYBPHLA2RUH7 354 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 PLPP4Q5VZY2 271 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 ZNF280DQ6N043 979 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 ANKS3Q6ZW76 656 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 TMC7Q7Z402 723 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 GLYCTKQ8IVS8 523 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 TFAP2BQ92481 460 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 LRCH3Q96II8 777 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 TLR9Q9NR96 1032 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 MTRRQ9UBK8 725 aa27.05■■□□□ 1.92
SSBP3-202ENST00000357475 HIDE1A8MVS5 230 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 AKR1B15C9JRZ8 316 aaPredicted RBP27.04■■□□□ 1.92
SSBP3-202ENST00000357475 SSTR3P32745 418 aaPredicted RBP27.04■■□□□ 1.92
SSBP3-202ENST00000357475 UBE3AQ05086 875 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 IRF2BP2Q7Z5L9 587 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 THEM5Q8N1Q8 247 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 IQCDQ96DY2 449 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 PKMYT1Q99640 499 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 CLSTN3Q9BQT9 956 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 ACBD6Q9BR61 282 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 TTYH1Q9H313 450 aaPredicted RBP27.04■■□□□ 1.92
SSBP3-202ENST00000357475 ZNF576Q9H609 170 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 ENTPD7Q9NQZ7 604 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 MRPL17Q9NRX2 175 aaKnown RBP27.04■■□□□ 1.92
SSBP3-202ENST00000357475 CDY1Q9Y6F8 540 aa27.04■■□□□ 1.92
SSBP3-202ENST00000357475 FSCN2O14926 492 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 LPXNO60711 386 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 CXCL14O95715 111 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 BRD2P25440 801 aaKnown RBP27.03■■□□□ 1.92
SSBP3-202ENST00000357475 CA8P35219 290 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 ARPP19P56211 112 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 INTS6LQ5JSJ4 861 aaKnown RBP27.03■■□□□ 1.92
SSBP3-202ENST00000357475 SFMBT2Q5VUG0 894 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 CRYBG2Q8N1P7 616 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 TTC39CQ8N584 583 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 B3GALNT2Q8NCR0 500 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 ZCWPW1Q9H0M4 648 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 FAM124BQ9H5Z6 455 aaPredicted RBP27.03■■□□□ 1.92
SSBP3-202ENST00000357475 ABHD10Q9NUJ1 306 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 FAM49BQ9NUQ9 324 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 GTF3C4Q9UKN8 822 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 CDH9Q9ULB4 789 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 MYO6Q9UM54 1294 aa27.03■■□□□ 1.92
SSBP3-202ENST00000357475 PLXNA3P51805 1871 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms