RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TMCO1Q9UM00 188 aa12.75□□□□□ -0.37
SMARCAL1-201ENST00000357276 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
SMARCAL1-201ENST00000357276 DENND3A2RUS2 1198 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 K7ENM7 598 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 KLF11O14901 512 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 SERPINB2P05120 415 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 ESRRAP11474 423 aaPredicted RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 EEF2P13639 858 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 PGM1P36871 562 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 TTC7BQ86TV6 843 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 TMPRSS6Q8IU80 811 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 ZBED8Q8IZ13 594 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 DCAKDQ8WVC6 231 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 ACCSQ96QU6 501 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 PANX3Q96QZ0 392 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 VPS37BQ9H9H4 285 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 DNPEPQ9ULA0 475 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 ZSCAN5DPP0CG00 497 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 GTF2BQ00403 316 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 CDC16Q13042 620 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 OASLQ15646 514 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 TRMT5Q32P41 509 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 HSF5Q4G112 596 aaPredicted RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 KRT39Q6A163 491 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 CENPUQ71F23 418 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 MARK2Q7KZI7 788 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 PPP2R3CQ969Q6 453 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 WDR83Q9BRX9 315 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 EPB41L1Q9H4G0 881 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 ACSS3Q9H6R3 686 aa12.74□□□□□ -0.37
SMARCAL1-201ENST00000357276 FCHO1O14526 889 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 CREB3O43889 395 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 RNASEH1O60930 286 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 TM7SF2O76062 418 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 ZCCHC18P0CG32 403 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 PYGBP11216 843 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 DHX38Q92620 1227 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 TMEM8AQ9HCN3 771 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 ATP2B4P23634 1241 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 ARSEP51690 589 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 ARL4CP56559 192 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 PDIA2Q13087 525 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 EFTUD2Q15029 972 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 CCDC62Q6P9F0 684 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 GSTA5Q7RTV2 222 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 FNBP1Q96RU3 617 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 CENPKQ9BS16 269 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 E7ESA3 106 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 NDC80O14777 642 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 FAM155BO75949 473 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 ETS1P14921 441 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 GLRA2P23416 452 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 PTPN7P35236 360 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 GCNT1Q02742 428 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 SLC18A2Q05940 514 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 HP1BP3Q5SSJ5 553 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 LLGL2Q6P1M3 1020 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 FBXO27Q8NI29 283 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 NMUR2Q9GZQ4 415 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 C12orf65Q9H3J6 166 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
SMARCAL1-201ENST00000357276 WDR91A4D1P6 747 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 CHMP2AO43633 222 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 UFL1O94874 794 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 ZNF76P36508 570 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 RANBP1P43487 201 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SH3BGRP55822 239 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SNAP25P60880 206 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 NFX1Q12986 1120 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 GPS1Q13098 491 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 RASIP1Q5U651 963 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 KYAT3Q6YP21 454 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 RIPOR1Q6ZS17 1223 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 NLRX1Q86UT6 975 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 TREML1Q86YW5 311 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 CCDC110Q8TBZ0 833 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 NKD2Q969F2 451 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 PAFAH2Q99487 392 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 LBHD1Q9BQE6 289 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 STRIP2Q9ULQ0 834 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SUGT1Q9Y2Z0 365 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 ITGAVP06756 1048 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 CDK18Q07002 472 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 USH1GQ495M9 461 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 PDSS2Q86YH6 399 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms