RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 OLFML1Q6UWY5 402 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 NCCRP1Q6ZVX7 275 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ENDOVQ8N8Q3 282 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 C12orf50Q8NA57 414 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 IL31RAQ8NI17 732 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 HELQQ8TDG4 1101 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 WDR60Q8WVS4 1066 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CFAP57Q96MR6 1250 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 NMRK1Q9NWW6 199 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 DNPEPQ9ULA0 475 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ADGRA3Q8IWK6 1321 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SGK1O00141 431 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TLR3O15455 904 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 HARSP12081 509 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCNB1P14635 433 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ADSSP30520 456 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 LMNB2Q03252 620 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 PDIA2Q13087 525 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLC1A5Q15758 541 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CLEC16AQ2KHT3 1053 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 PARP6Q2NL67 630 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ANKS1BQ7Z6G8 1248 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 LDHDQ86WU2 507 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SCYL3Q8IZE3 742 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 MCOLN2Q8IZK6 566 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 GMCL1P1Q8NEA9 526 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 PPP1R14BQ96C90 147 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 GRAMD1AQ96CP6 724 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 KCND2Q9NZV8 630 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SAE1Q9UBE0 346 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 GRID1Q9ULK0 1009 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SUGT1Q9Y2Z0 365 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 RGL2O15211 777 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 P4HA2O15460 535 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 DCTN3O75935 186 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TCF4P15884 667 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ALOX15P16050 662 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ADRA2BP18089 450 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CETN2P41208 172 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 QARSP47897 775 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CAV1Q03135 178 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 BTG3Q14201 252 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLC44A4Q53GD3 710 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZNF394Q53GI3 561 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM270Q6UE05 265 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM110Q86TL2 294 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TRABD2AQ86V40 505 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 AGGF1Q8N302 714 aaeCLIP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 STKLD1Q8NE28 680 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 C7orf43Q8WVR3 580 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 LENG1Q96BZ8 264 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZDHHC15Q96MV8 337 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 FNBP1Q96RU3 617 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 HAPLN3Q96S86 360 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CENPKQ9BS16 269 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM121Q9BTD3 319 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 DCLRE1BQ9H816 532 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 KMT5AQ9NQR1 393 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 ETNK2Q9NVF9 386 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCPG1Q9ULG6 757 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 MRPL11Q9Y3B7 192 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 NHSQ6T4R5 1651 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 PIK3CDO00329 1044 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 MTA2O94776 668 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 LMNAP02545 664 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 FDX1P10109 184 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ADRA1DP25100 572 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 PIK3CAP42336 1068 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 DMP1Q13316 513 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 KPNB1Q14974 876 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 EFTUD2Q15029 972 aaKnown RBP eCLIP8.66□□□□□ -1.021e-8■■■□□ 19.1
CDC42SE1-201ENST00000357235 UGCGQ16739 394 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 FYB2Q5VWT5 728 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 OLFML2BQ68BL8 750 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 NLRP9Q7RTR0 991 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZNF554Q86TJ5 538 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 RHOT1Q8IXI2 618 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 SNRNP27Q8WVK2 155 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 UPF1Q92900 1129 aaKnown RBP eCLIP8.66□□□□□ -1.021e-6■□□□□ 10.5
CDC42SE1-201ENST00000357235 VTI1AQ96AJ9 217 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 MCUR1Q96AQ8 359 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 DENND2DQ9H6A0 471 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM8AQ9HCN3 771 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 CDK5RAP2Q96SN8 1893 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 C2orf71A6NGG8 1288 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 NFIBO00712 420 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ASMTLO95671 621 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 KRT1P04264 644 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ITGA2BP08514 1039 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ETS2P15036 469 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 SSTR1P30872 391 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ACOT2P49753 483 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 RASSF2P50749 326 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 MTMR1Q13613 665 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 TATDN1Q6P1N9 297 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms