RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 C16orf86Q6ZW13 317 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 MICU2Q8IYU8 434 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 EFHBQ8N7U6 833 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 TNIP2Q8NFZ5 429 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 CAVIN3Q969G5 261 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 RPAP3Q9H6T3 665 aaPredicted RBP15.48■□□□□ 0.07
CHD4-201ENST00000357008 ACADSBP45954 432 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 NUDT2P50583 147 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 KIZQ2M2Z5 673 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 GJB7Q6PEY0 223 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 SP8Q8IXZ3 490 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 ELMOD1Q8N336 334 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 B4GALNT2Q8NHY0 566 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 USP33Q8TEY7 942 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 NIF3L1Q9GZT8 377 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 ILKAPQ9H0C8 392 aaPredicted RBP15.48■□□□□ 0.07
CHD4-201ENST00000357008 SFMBT1Q9UHJ3 866 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 HPSEQ9Y251 543 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
CHD4-201ENST00000357008 IL18RAPO95256 599 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 CSF1RP07333 972 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 WNK4Q96J92 1243 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 CNBD2Q96M20 576 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 H3BQF6 201 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 EXTL3O43909 919 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
CHD4-201ENST00000357008 DAGLBQ8NCG7 672 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 DCUN1D1Q96GG9 259 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 FUCA2Q9BTY2 467 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 DUSP10Q9Y6W6 482 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 ASB14A6NK59 587 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 SMTNL2Q2TAL5 461 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 ACCSLQ4AC99 568 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 P3H2Q8IVL5 708 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 DDHD1Q8NEL9 900 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 PRPF4O43172 522 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■□□□ 12.1
CHD4-201ENST00000357008 GTF2H1P32780 548 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 CDC42EP1Q00587 391 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 MTM1Q13496 603 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 ARHGEF1Q92888 912 aaKnown RBP15.47■□□□□ 0.07
CHD4-201ENST00000357008 ZNF669Q96BR6 464 aaPredicted RBP15.47■□□□□ 0.07
CHD4-201ENST00000357008 ZNF263O14978 683 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 GLRA3O75311 464 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 CSPG5O95196 566 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 THRAP10827 490 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 RASA1P20936 1047 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 NUP107P57740 925 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 EMC2Q15006 297 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 DDX50Q9BQ39 737 aaKnown RBP15.47■□□□□ 0.07
CHD4-201ENST00000357008 PON1P27169 355 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 PTK6Q13882 451 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 BOLA3Q53S33 107 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 SCUBE1Q8IWY4 988 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 RBBP8Q99708 897 aa15.47■□□□□ 0.07
CHD4-201ENST00000357008 RFC5P40937 340 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 PTGER2P43116 358 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 KCNMA1Q12791 1236 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 NAPEPLDQ6IQ20 393 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 LAYNQ6UX15 382 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 SLC39A10Q9ULF5 831 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 IQGAP3Q86VI3 1631 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 IGSF9BQ9UPX0 1349 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 SUPT3HB4E1H0 165 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 CALB2P22676 271 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 TRIM65Q6PJ69 517 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 OTULINQ96BN8 352 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 E2F8A0AVK6 867 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 GRAP2O75791 330 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 SERPINI2O75830 405 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 EXOSC4Q9NPD3 245 aaKnown RBP15.46■□□□□ 0.07
CHD4-201ENST00000357008 AGPAT3Q9NRZ7 376 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.07
CHD4-201ENST00000357008 COPG1Q9Y678 874 aaKnown RBP15.46■□□□□ 0.07
CHD4-201ENST00000357008 SLC30A1Q9Y6M5 507 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 ZBTB39O15060 712 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 SKOR1P84550 965 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 ANKRD27Q96NW4 1050 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 GLI2P10070 1586 aa15.46■□□□□ 0.07
CHD4-201ENST00000357008 CPB1P15086 417 aa15.46■□□□□ 0.06
CHD4-201ENST00000357008 HERVK_113P62684 666 aa15.46■□□□□ 0.06
CHD4-201ENST00000357008 UBE3AQ05086 875 aa15.46■□□□□ 0.06
CHD4-201ENST00000357008 TRIM16LQ309B1 348 aa15.46■□□□□ 0.06
CHD4-201ENST00000357008 APOBEC3FQ8IUX4 373 aaKnown RBP15.46■□□□□ 0.06
CHD4-201ENST00000357008 C17orf80Q9BSJ5 609 aa15.46■□□□□ 0.06
CHD4-201ENST00000357008 CD274Q9NZQ7 290 aa15.46■□□□□ 0.06
CHD4-201ENST00000357008 CLASP2O75122 1294 aaKnown RBP15.45■□□□□ 0.06
CHD4-201ENST00000357008 GHRP10912 638 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 EPC2Q52LR7 807 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 GPR141Q7Z602 305 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 TRIM69Q86WT6 500 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 LPAR1Q92633 364 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 IL1RL2Q9HB29 575 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 DCDC2Q9UHG0 476 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 PRR12Q9ULL5 1215 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 A0A1B0GW55 424 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 DUX4L2P0CJ85 424 aa15.45■□□□□ 0.06
CHD4-201ENST00000357008 DUX4L3P0CJ86 424 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms