RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 CCDC134Q9H6E4 229 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 MTO1Q9Y2Z2 717 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 DUOX1Q9NRD9 1551 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 MCF2LO15068 1137 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PTK6Q13882 451 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 KCTD2Q14681 263 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PDK4Q16654 411 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 ARHGAP18Q8N392 663 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 SAE1Q9UBE0 346 aaPredicted RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 E7ENQ6 273 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 PIK3CDO00329 1044 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
BDNF-202ENST00000356660 ARP10275 920 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SAT1P21673 171 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 PSMA2P25787 234 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 HIC1Q14526 733 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 KRT81Q14533 505 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
BDNF-202ENST00000356660 ATG16L1Q676U5 607 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 CLNKQ7Z7G1 428 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 FAF2Q96CS3 445 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
BDNF-202ENST00000356660 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 AKAP11Q9UKA4 1901 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 BCL9O00512 1426 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 KRT37O76014 449 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 FESP07332 822 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 CETPP11597 493 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 ACOT2P49753 483 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 PDE1BQ01064 536 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 CENPCQ03188 943 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SLC45A4Q5BKX6 768 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 FBXO36Q8NEA4 188 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
BDNF-202ENST00000356660 MCEEQ96PE7 176 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 MEI4A8MW99 385 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
BDNF-202ENST00000356660 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
BDNF-202ENST00000356660 PSMC4P43686 418 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 FMO1Q01740 532 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
BDNF-202ENST00000356660 CCNG2Q16589 344 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 GEN1Q17RS7 908 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 KCNT1Q5JUK3 1230 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 NXNQ6DKJ4 435 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
BDNF-202ENST00000356660 RGPD5Q99666 1765 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 WDR64B1ANS9 1081 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 MEIS2O14770 477 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 USP1O94782 785 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 MAP3K6O95382 1288 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 CHRNB2P17787 502 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 ZC3H12AQ5D1E8 599 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 FAM182AQ5T1J6 154 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 SPOPLQ6IQ16 392 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 TRIM42Q8IWZ5 723 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 OLFM3Q96PB7 478 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 WASF2Q9Y6W5 498 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 KAT6AQ92794 2004 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 FAM237BA0A1B0GVD1 139 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 FSCN2O14926 492 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 DNAJC6O75061 913 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 PYGBP11216 843 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 TUBP50607 506 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 MGAT5Q09328 741 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 CDO1Q16878 200 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 HYIQ5T013 277 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 C1orf186Q6ZWK4 172 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 ZDHHC14Q8IZN3 488 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 POU5F2Q8N7G0 328 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 GABBR1Q9UBS5 961 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 COL5A2P05997 1499 aaPredicted RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 MYH3P11055 1940 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 E2F8A0AVK6 867 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 STK10O94804 968 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 ADRA2BP18089 450 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 SREBF1P36956 1147 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms