RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ESYT3A0FGR9 886 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 C2orf81A6NN90 581 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 PPP1R37O75864 691 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 IGKV5-2P06315 115 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 WEE2P0C1S8 567 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 ENO3P13929 434 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 CHN1P15882 459 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 RPS12P25398 132 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 TAF6P49848 677 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 PMS1P54277 932 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 MRPS25P82663 173 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 GUCY1A3Q02108 690 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 TWF1Q12792 350 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 MGAT5BQ3V5L5 792 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 COBLL1Q53SF7 1204 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 ZNF438Q7Z4V0 828 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 CDR2LQ86X02 465 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 ZNF507Q8TCN5 953 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 AGR3Q8TD06 166 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 ZNF512BQ96KM6 892 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 MRPS26Q9BYN8 205 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 MTMR4Q9NYA4 1195 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 SLC25A13Q9UJS0 675 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 IPPQ9Y573 584 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 PSTPIP1O43586 416 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 ADCY3O60266 1144 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 FAM200BP0CF97 657 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 IRF1P10914 325 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 POLD3Q15054 466 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 TRIM71Q2Q1W2 868 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 ZRANB3Q5FWF4 1079 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 CYP4Z1Q86W10 505 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 SAMD3Q8N6K7 520 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 USP6NLQ92738 828 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 AGAP3Q96P47 875 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 TRMT6Q9UJA5 497 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 ADCY10Q96PN6 1610 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 REREQ9P2R6 1566 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 KANSL1LA0AUZ9 987 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 IFNA14P01570 189 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 PGK2P07205 417 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 FNTAP49354 379 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 TGM3Q08188 693 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 STX5Q13190 355 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 CCDC142Q17RM4 750 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 AGAP9Q5VTM2 703 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 SHC4Q6S5L8 630 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 BRINP3Q76B58 766 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 NLRP9Q7RTR0 991 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 CHSY1Q86X52 802 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 MICALL2Q8IY33 904 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 ADSSL1Q8N142 457 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 USP33Q8TEY7 942 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 TFB1MQ8WVM0 346 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 CPA5Q8WXQ8 436 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 RIN2Q8WYP3 895 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 GPRASP2Q96D09 838 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 FAM84BQ96KN1 310 aaPredicted RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 REEP2Q9BRK0 252 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 TMEM117Q9H0C3 514 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 PAPOLBQ9NRJ5 636 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 WWOXQ9NZC7 414 aa6.74□□□□□ -1.33
UPF2-201ENST00000356352 UBQLN1Q9UMX0 589 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 AAR2Q9Y312 384 aaKnown RBP6.74□□□□□ -1.33
UPF2-201ENST00000356352 FAM196BA6NMK8 535 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 F8W810 466 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 M0R3G1 203 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 UCHL3P15374 230 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 CCND1P24385 295 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 MZF1P28698 734 aaPredicted RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 CASP1P29466 404 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 RRM2P31350 389 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 GUCA1AP43080 201 aaPredicted RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 PTGER2P43116 358 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 RGS7P49802 495 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 MMP14P50281 582 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 DPYDQ12882 1025 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 CEP78Q5JTW2 689 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 MRNIPQ6NTE8 343 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 KDELC2Q7Z4H8 507 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 SUGP1Q8IWZ8 645 aaKnown RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 CAMKK2Q96RR4 588 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 DNAJC7Q99615 494 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 BRD8Q9H0E9 1235 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 KIAA1257Q9ULG3 409 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 DYNC1LI2O43237 492 aaPredicted RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 C6orf222P0C671 652 aaPredicted RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 GALCP54803 685 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 GEMIN4P57678 1058 aaKnown RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 PURAQ00577 322 aaKnown RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 PRKCEQ02156 737 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 ZNF177Q13360 481 aaPredicted RBP6.73□□□□□ -1.33
UPF2-201ENST00000356352 ADRM1Q16186 407 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 BOLA3Q53S33 107 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 RNF180Q86T96 592 aa6.73□□□□□ -1.33
UPF2-201ENST00000356352 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms