RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ACSF2Q96CM8 615 aaPredicted RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 KCNH7Q9NS40 1196 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 RIPK2O43353 540 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 APOEP02649 317 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 KIRREL3Q8IZU9 778 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 GPRC5CQ9NQ84 441 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 WHRNQ9P202 907 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 STAP1Q9ULZ2 295 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 ANP32DO95626 131 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 HSPA4LO95757 839 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 ARP10275 920 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 CYP2C8P10632 490 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 RPS6KA2Q15349 733 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 GRIK5Q16478 980 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 ENTPD7Q9NQZ7 604 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 ADORA2AP29274 412 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 SLC26A2P50443 739 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 AADACL2Q6P093 401 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 APPL2Q8NEU8 664 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 GANQ9H2C0 597 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 XPO7Q9UIA9 1087 aaKnown RBP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 MRC1P22897 1456 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 KIF13AQ9H1H9 1805 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 NEMP1O14524 444 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 GSTA1P08263 222 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 GHRP10912 638 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 CYP11B1P15538 503 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 AP2B1P63010 937 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 BTBD8Q5XKL5 378 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
COLCA1-201ENST00000355430 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 YY1AP1Q9H869 796 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 NDE1Q9NXR1 346 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 PHTF1Q9UMS5 762 aa12.92□□□□□ -0.34
COLCA1-201ENST00000355430 GRIK1P39086 918 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 ALDH18A1P54886 795 aaKnown RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 RBP5P82980 135 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 KDSRQ06136 332 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 RWDD4Q6NW29 188 aaKnown RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 ARHGEF19Q8IW93 802 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 MREGQ8N565 214 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 DNAJC19Q96DA6 116 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 MAGEB18Q96M61 343 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 POP1Q99575 1024 aaKnown RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 CDH6P55285 790 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 TAP1Q03518 808 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 FAM102AQ5T9C2 384 aaPredicted RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 C11orf63Q6NUN7 778 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 TLK1Q9UKI8 766 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 FAM86B1E9PN63 330 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 PIK3R2O00459 728 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 GPC4O75487 556 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 LRG1P02750 347 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 FAM86B2P0C5J1 330 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 RIBC1Q8N443 379 aaPredicted RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 LRGUKQ96M69 825 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 HAO1Q9UJM8 370 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 ENO4A6NNW6 628 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 RAD51Q06609 339 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 KCNA1Q09470 495 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 SPOPLQ6IQ16 392 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 HAS1Q92839 578 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 VPS11Q9H270 941 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 DYRK4Q9NR20 520 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 MSRAQ9UJ68 235 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 TBX20Q9UMR3 447 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 SHBGP04278 402 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 KRT3P12035 628 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 PTPRAP18433 802 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 SHMT1P34896 483 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 PPARGP37231 505 aaPredicted RBP12.91□□□□□ -0.34
COLCA1-201ENST00000355430 ACTR2P61160 394 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 ART3Q13508 389 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 CYP4F11Q9HBI6 524 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 TRPC7Q9HCX4 862 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 OLFML3Q9NRN5 406 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
COLCA1-201ENST00000355430 NID2Q14112 1375 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 AMHP03971 560 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 FGRP09769 529 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms