RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 SZRD1Q7Z422 152 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 USP33Q8TEY7 942 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 PBXIP1Q96AQ6 731 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 SEC16BQ96JE7 1060 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 CGRRF1Q99675 332 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 MAPTP10636 758 aaKnown RBP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 FDFT1P37268 417 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 KCNJ1P48048 391 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 GEMIN4P57678 1058 aaKnown RBP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 PAPD7Q5XG87 772 aaKnown RBP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 ZNF720Q7Z2F6 126 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 KDELC2Q7Z4H8 507 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 PRUNE1Q86TP1 453 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 RAB42Q8N4Z0 105 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 SH3KBP1Q96B97 665 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 C20orf96Q9NUD7 363 aaPredicted RBP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 PCDHGB4Q9UN71 923 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 SGPL1O95470 568 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 DDX42Q86XP3 938 aaKnown RBP eCLIP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 AGR3Q8TD06 166 aa17.09■□□□□ 0.33
SHTN1-202ENST00000355371 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
SHTN1-202ENST00000355371 NDUFS3O75489 264 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.33
SHTN1-202ENST00000355371 HIST1H2AGP0C0S8 130 aaPredicted RBP17.08■□□□□ 0.33
SHTN1-202ENST00000355371 VDRP11473 427 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 HIST1H2ADP20671 130 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 SLC26A2P50443 739 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 CYP4A22Q5TCH4 519 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 SRLQ86TD4 932 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 LINC00523Q86TU6 105 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 HIST1H2AHQ96KK5 128 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 OLFM3Q96PB7 478 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 HIST1H2AJQ99878 128 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 H2AFJQ9BTM1 129 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 MROH8Q9H579 483 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 TASP1Q9H6P5 420 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.08■□□□□ 0.33
SHTN1-202ENST00000355371 CYP11B1P15538 503 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 KIF17Q9P2E2 1029 aa17.08■□□□□ 0.33
SHTN1-202ENST00000355371 FAM205AQ6ZU69 1335 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 C17orf102A2RUQ5 167 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 HMOX2P30519 316 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 GTF2A2P52657 109 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 INPP5AQ14642 412 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 TMEM259Q4ZIN3 620 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 FAM71DQ8N9W8 422 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 CASS4Q9NQ75 786 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
SHTN1-202ENST00000355371 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 OCA2Q04671 838 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 KDSRQ06136 332 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.32
SHTN1-202ENST00000355371 SLC29A2Q14542 456 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.32
SHTN1-202ENST00000355371 PPP2R3BQ9Y5P8 575 aa17.08■□□□□ 0.32
SHTN1-202ENST00000355371 HSD17B3P37058 310 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 ACTRT1Q8TDG2 376 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 ZKSCAN4Q969J2 545 aaPredicted RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 WARS2Q9UGM6 360 aaKnown RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 SLC30A1Q9Y6M5 507 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 KRT16P08779 473 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 IL31Q6EBC2 164 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 RIN2Q8WYP3 895 aaPredicted RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 KCNK16Q96T55 309 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 FAM118BQ9BPY3 351 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 PABPC3Q9H361 631 aaKnown RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 AGO4Q9HCK5 861 aaKnown RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 PTK6Q13882 451 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 TRPM8Q7Z2W7 1104 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 GPRC5CQ9NQ84 441 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 PYGLP06737 847 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 ODC1P11926 461 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 PDK2Q15119 407 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
SHTN1-202ENST00000355371 ZNF512Q96ME7 567 aaPredicted RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 MRPL1Q9BYD6 325 aaKnown RBP17.07■□□□□ 0.32
SHTN1-202ENST00000355371 ARHGAP10A1A4S6 786 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 FAM107AO95990 144 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 PDHA1P08559 390 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 SLC2A3P11169 496 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 NCAM1P13591 858 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 PTK2BQ14289 1009 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CASKIN2Q8WXE0 1202 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 TFR2Q9UP52 801 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 ZNF263O14978 683 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 LSM8O95777 96 aaKnown RBP17.06■□□□□ 0.32
SHTN1-202ENST00000355371 PTGER2P43116 358 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CASP4P49662 377 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 IRAK1P51617 712 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 THEMIS2Q5TEJ8 643 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 MFN1Q8IWA4 741 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms