RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ARMCX5Q6P1M9 558 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 TTC8Q8TAM2 541 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 FAM126AQ9BYI3 521 aaPredicted RBP17.14■□□□□ 0.33
PDGFA-201ENST00000354513 SMG9Q9H0W8 520 aaKnown RBP17.14■□□□□ 0.33
PDGFA-201ENST00000354513 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 SRPRBQ9Y5M8 271 aaKnown RBP17.14■□□□□ 0.33
PDGFA-201ENST00000354513 HMGA1P17096 107 aaKnown RBP17.13■□□□□ 0.33
PDGFA-201ENST00000354513 ABCD1P33897 745 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 GPR15P49685 360 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 CCR3P51677 355 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 TNK2Q07912 1038 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 PUM1Q14671 1186 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDGFA-201ENST00000354513 CCDC142Q17RM4 750 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 MGAT5BQ3V5L5 792 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 SLFN12LQ6IEE8 588 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 DGLUCYQ7Z3D6 616 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 BRSK2Q8IWQ3 736 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 KRI1Q8N9T8 703 aaKnown RBP17.13■□□□□ 0.33
PDGFA-201ENST00000354513 CSGALNACT1Q8TDX6 532 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 GIPC2Q8TF65 315 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 POMGNT1Q8WZA1 660 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 MSANTD3Q96H12 275 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 PKMYT1Q99640 499 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 SLC46A2Q9BY10 475 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 TASP1Q9H6P5 420 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 OBP2AQ9NY56 170 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 TBC1D7Q9P0N9 293 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 DSEQ9UL01 958 aa17.13■□□□□ 0.33
PDGFA-201ENST00000354513 FRMD3A2A2Y4 597 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 TADA3O75528 432 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 PAPSS2O95340 614 aaPredicted RBP17.12■□□□□ 0.33
PDGFA-201ENST00000354513 F11P03951 625 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
PDGFA-201ENST00000354513 ITIH5Q86UX2 942 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 YAF2Q8IY57 180 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 C1orf127Q8N9H9 656 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 SAAL1Q96ER3 474 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 C8orf33Q9H7E9 229 aaPredicted RBP17.12■□□□□ 0.33
PDGFA-201ENST00000354513 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 SPAG17Q6Q759 2223 aa17.12■□□□□ 0.33
PDGFA-201ENST00000354513 HCRTO43612 131 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 IL18RAPO95256 599 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 FGF19O95750 216 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 POLR2BP30876 1174 aaKnown RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 TUFMP49411 452 aaKnown RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 SRSF5Q13243 272 aaKnown RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 CCINQ13939 588 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 PON2Q15165 354 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 LPAL2Q16609 132 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 SV2CQ496J9 727 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 PKN3Q6P5Z2 889 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 OSTM1Q86WC4 334 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 RALGPS2Q86X27 583 aaPredicted RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 SPPL2BQ8TCT7 592 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 BPIFB1Q8TDL5 484 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 OLFML3Q9NRN5 406 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
PDGFA-201ENST00000354513 SEL1LQ9UBV2 794 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
PDGFA-201ENST00000354513 PTPRJQ12913 1337 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 OTOL1A6NHN0 477 aaPredicted RBP17.1■□□□□ 0.33
PDGFA-201ENST00000354513 CHURC1-FNTBB4DL54 471 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 ITGB3P05106 788 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 SYT1P21579 422 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 CDC25CP30307 473 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 CXCL12P48061 93 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 FNTBP49356 437 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 KPNA1P52294 538 aaPredicted RBP17.1■□□□□ 0.33
PDGFA-201ENST00000354513 NLRP12P59046 1061 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 ARHGAP15Q53QZ3 475 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 METTL23Q86XA0 190 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 PDCL2Q8N4E4 241 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 GLIS3Q8NEA6 775 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 FAM200AQ8TCP9 573 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 USP28Q96RU2 1077 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 CBWD1Q9BRT8 395 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 SIX4Q9UIU6 781 aa17.1■□□□□ 0.33
PDGFA-201ENST00000354513 MORC2Q9Y6X9 1032 aaPredicted RBP17.1■□□□□ 0.33
PDGFA-201ENST00000354513 GOLGA8IPA6NC78 632 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 GOLGA8JA6NMD2 632 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 HRO43593 1189 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 GCNT3O95395 438 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 GAP43P17677 238 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 CEBPZQ03701 1054 aaKnown RBP17.09■□□□□ 0.33
PDGFA-201ENST00000354513 LRRC32Q14392 662 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 VEPH1Q14D04 833 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 POSTNQ15063 836 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 SDHAF4Q5VUM1 108 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 RRAGBQ5VZM2 374 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms