RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 STX16-NPEPL1H3BU86 382 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 STX16O14662 325 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 HOXC11O43248 304 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ALDH1A2O94788 518 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TOX4O94842 621 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 GJB1P08034 283 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ARP10275 920 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MST1P26927 711 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ATICP31939 592 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF135P52742 658 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CSRP2Q16527 193 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MEA1Q16626 185 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 DGKDQ16760 1214 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 WDR72Q3MJ13 1102 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FBXO47Q5MNV8 452 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ITPRIPL1Q6GPH6 555 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF783Q6ZMS7 281 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 AMIGO3Q86WK7 504 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FAM126BQ8IXS8 530 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PDZD8Q8NEN9 1154 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 OR7D4Q8NG98 312 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PEX11GQ96HA9 241 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TLR10Q9BXR5 811 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 DPH1Q9BZG8 443 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ALDH8A1Q9H2A2 487 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SMOC2Q9H3U7 446 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PRDM8Q9NQV8 689 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF212Q9UDV6 495 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SHPRHQ149N8 1683 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CCDC78A2IDD5 438 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CDHR4A6H8M9 788 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FAM171A2A8MVW0 826 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 USO1O60763 962 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PPP6R2O75170 966 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF888P0CJ79 500 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 XPAP23025 273 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ABCD3P28288 659 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 KRT9P35527 623 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TOB1P50616 345 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 YBX1P67809 324 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SLC12A1Q13621 1099 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PTK2BQ14289 1009 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 STILQ15468 1287 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TBCCQ15814 346 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PTCHD3Q3KNS1 767 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SYT13Q7L8C5 426 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 IRF2BP1Q8IU81 584 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TCP11L2Q8N4U5 519 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CEP70Q8NHQ1 597 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SMARCC2Q8TAQ2 1214 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CENPIQ92674 756 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ALG3Q92685 438 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 STAMQ92783 540 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 HVCN1Q96D96 273 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 LTV1Q96GA3 475 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 METTL22Q9BUU2 404 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MECRQ9BV79 373 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TTYH3Q9C0H2 523 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PAIP1Q9H074 479 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TBC1D29Q9UFV1 150 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 GPR34Q9UPC5 381 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TMEM131LA2VDJ0 1609 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 KIF7Q2M1P5 1343 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 PGPEP1LA6NFU8 196 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 AGPSO00116 658 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 SRGAP3O43295 1099 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 TBC1D4O60343 1298 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ENO2P09104 434 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 LTA4HP09960 611 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 AKR1B1P15121 316 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CD6P30203 668 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ELF1P32519 619 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 GALNSP34059 522 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 RAD52P43351 418 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 GALNT2Q10471 571 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 KLHL17Q6TDP4 642 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CATSPERGQ6ZRH7 1159 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 RNF169Q8NCN4 708 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 HDAC2Q92769 488 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 LRIG1Q96JA1 1093 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 LBHD1Q9BQE6 289 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 SDF4Q9BRK5 362 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 HERC2P3Q9BVR0 1158 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 SGPP1Q9BX95 441 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 MS4A7Q9GZW8 240 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 WASH6PQ9NQA3 447 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 TBC1D22BQ9NU19 505 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ZDHHC7Q9NXF8 308 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 GPRC5DQ9NZD1 345 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 HSF4Q9ULV5 492 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 DIP2AQ14689 1571 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CASZ1Q86V15 1759 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 A0A087WWL8 130 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 KIF28PB7ZC32 967 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FOXN3O00409 490 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 IRAK2O43187 625 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CUTAO60888 179 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ACTL6BO94805 426 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ENDOD1O94919 500 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms