RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 SCN1AP35498 2009 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 SMIM23A6NLE4 172 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 EIF3HO15372 352 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■■□□□ 12.6
MBD1-205ENST00000353909 CELF2O95319 508 aaKnown RBP16.46■□□□□ 0.23
MBD1-205ENST00000353909 CALB1P05937 261 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 EIF4BP23588 611 aaKnown RBP16.46■□□□□ 0.23
MBD1-205ENST00000353909 POU5F1BQ06416 359 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 EMC1Q8N766 993 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 OR6J1Q8NGC5 347 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 CPA4Q9UI42 421 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 AGAP1Q9UPQ3 857 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 CAND2O75155 1236 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 CDH5P33151 784 aaPredicted RBP16.46■□□□□ 0.23
MBD1-205ENST00000353909 CHKAP35790 457 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
MBD1-205ENST00000353909 RSPH14Q9UHP6 348 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 HES2Q9Y543 173 aa16.46■□□□□ 0.23
MBD1-205ENST00000353909 ZSWIM8A7E2V4 1837 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 PIK3R2O00459 728 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 ERLIN2O94905 339 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 ATF7P17544 494 aaPredicted RBP16.46■□□□□ 0.22
MBD1-205ENST00000353909 NFX1Q12986 1120 aaKnown RBP16.46■□□□□ 0.22
MBD1-205ENST00000353909 ARFGAP1Q8N6T3 406 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 GLIS1Q8NBF1 620 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 EXD1Q8NHP7 514 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 SLCO2A1Q92959 643 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 CALCOCO1Q9P1Z2 691 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 SLC45A1Q9Y2W3 748 aa16.46■□□□□ 0.22
MBD1-205ENST00000353909 A0A1B0GUA9 196 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 DYNC1LI2O43237 492 aaPredicted RBP16.45■□□□□ 0.22
MBD1-205ENST00000353909 MAGOHP61326 146 aaKnown RBP16.45■□□□□ 0.22
MBD1-205ENST00000353909 HIC1Q14526 733 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 PLEKHH3Q7Z736 793 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 BCAS4Q8TDM0 211 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 HPDLQ96IR7 371 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
MBD1-205ENST00000353909 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 TLDC2A0PJX2 215 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 ANKRD65E5RJM6 399 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 CILPO75339 1184 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 TMEM132DQ14C87 1099 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 SMTNL2Q2TAL5 461 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 KCNT1Q5JUK3 1230 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 C3orf20Q8ND61 904 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 HAUS1Q96CS2 278 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 MTRF1LQ9UGC7 380 aaKnown RBP16.45■□□□□ 0.22
MBD1-205ENST00000353909 LCMT1Q9UIC8 334 aa16.45■□□□□ 0.22
MBD1-205ENST00000353909 TRIP12Q14669 1992 aaPredicted RBP16.44■□□□□ 0.22
MBD1-205ENST00000353909 PPEF2O14830 753 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 KRT1P04264 644 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 ERBB2P04626 1255 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 MAN1A1P33908 653 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 SEC24CP53992 1094 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 PTPN11Q06124 597 aaPredicted RBP16.44■□□□□ 0.22
MBD1-205ENST00000353909 EMC10Q5UCC4 262 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 UBA3Q8TBC4 463 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 SLITRK1Q96PX8 696 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 ASB7Q9H672 318 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 FLRT1Q9NZU1 646 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 NEU2Q9Y3R4 380 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 NUDT17P0C025 328 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 HOXA11P31270 313 aaPredicted RBP16.44■□□□□ 0.22
MBD1-205ENST00000353909 SLCO1A2P46721 670 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 TNFAIP2Q03169 654 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 CALCOCO2Q13137 446 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 DGKDQ16760 1214 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 DENND2CQ68D51 928 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 C12orf29Q8N999 325 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 ZMAT2Q96NC0 199 aaKnown RBP16.44■□□□□ 0.22
MBD1-205ENST00000353909 ACAP3Q96P50 834 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 CEP83Q9Y592 693 aa16.44■□□□□ 0.22
MBD1-205ENST00000353909 COL1A2P08123 1366 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 KRT3P12035 628 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 IL1R2P27930 398 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 LSP1P33241 339 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 ITGA8P53708 1063 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 PSMC1P62191 440 aaKnown RBP16.43■□□□□ 0.22
MBD1-205ENST00000353909 ODF2Q5BJF6 829 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 RHBDF2Q6PJF5 856 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 ATL2Q8NHH9 583 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 EIF2AQ9BY44 585 aaKnown RBP16.43■□□□□ 0.22
MBD1-205ENST00000353909 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
MBD1-205ENST00000353909 DNPEPQ9ULA0 475 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 RIPK2O43353 540 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 MICAL2O94851 1124 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
MBD1-205ENST00000353909 CYP3A5P20815 502 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 ADCY8P40145 1251 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 MDH1P40925 334 aaKnown RBP16.43■□□□□ 0.22
MBD1-205ENST00000353909 CCT5P48643 541 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 PTK6Q13882 451 aa16.43■□□□□ 0.22
MBD1-205ENST00000353909 CCNG2Q16589 344 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms