RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RBM15Q96T37 977 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL17A1-201ENST00000353479 TRIM55Q9BYV6 548 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 ADAM33Q9BZ11 813 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 TPX2Q9ULW0 747 aaKnown RBP15.61■□□□□ 0.09
COL17A1-201ENST00000353479 COL14A1Q05707 1796 aaKnown RBP15.61■□□□□ 0.09
COL17A1-201ENST00000353479 TADA3O75528 432 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 ETFBP38117 255 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 MYBPC2Q14324 1141 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 FBXO47Q5MNV8 452 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 TAF2Q6P1X5 1199 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 PPP1R13LQ8WUF5 828 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 KLRG1Q96E93 195 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 WDCPQ9H6R7 721 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 KRT82Q9NSB4 513 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 CASQ2O14958 399 aaPredicted RBP15.6■□□□□ 0.09
COL17A1-201ENST00000353479 DNAJC6O75061 913 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
COL17A1-201ENST00000353479 EPHB2P29323 1055 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 KCNJ1P48048 391 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 CELF3Q5SZQ8 465 aaKnown RBP15.6■□□□□ 0.09
COL17A1-201ENST00000353479 RGMBQ6NW40 437 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 SDCCAG3Q96C92 435 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 SYT17Q9BSW7 474 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ENTPD7Q9NQZ7 604 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 F8VZ95 297 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ADCY3O60266 1144 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 RBP3P10745 1247 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 TREML2Q5T2D2 321 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 SLC27A1Q6PCB7 646 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 MIB1Q86YT6 1006 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 TATDN2Q93075 761 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 TIMM13Q9Y5L4 95 aaPredicted RBP15.6■□□□□ 0.09
COL17A1-201ENST00000353479 MAP3K7CLP57077 242 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 MDH1BQ5I0G3 518 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ULK4Q96C45 1275 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 CFAP69A5D8W1 941 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 GSTA4O15217 222 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ITIH2P19823 946 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ATICP31939 592 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 FASTKD1Q53R41 847 aaKnown RBP15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ZC3H15Q8WU90 426 aaKnown RBP15.6■□□□□ 0.09
COL17A1-201ENST00000353479 SLC20A1Q8WUM9 679 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 DPF3Q92784 378 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 FBXO32Q969P5 355 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 TMEM176AQ96HP8 235 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 PACSIN1Q9BY11 444 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 KCNMB3Q9NPA1 279 aa15.6■□□□□ 0.09
COL17A1-201ENST00000353479 ESRRAP11474 423 aaPredicted RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PPP2R2AP63151 447 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 IL1RL1Q01638 556 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 EFHBQ8N7U6 833 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PDCD7Q8N8D1 485 aaKnown RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 ZBTB45Q96K62 511 aaPredicted RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 RNF208Q9H0X6 261 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 NEU2Q9Y3R4 380 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PIK3CDO00329 1044 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 ACKR2O00590 384 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 MAPK13O15264 365 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 MTM1Q13496 603 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 LRRC14Q15048 493 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 ARHGAP15Q53QZ3 475 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 BOLA3Q53S33 107 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 JAMLQ86YT9 394 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PPARGC1AQ9UBK2 798 aaKnown RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 ZC3H7BQ9UGR2 993 aaKnown RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 ITGA11Q9UKX5 1188 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 ATRNO75882 1429 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PEAK1Q9H792 1746 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PSMD10O75832 226 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 BCAT1P54687 386 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 TTC23LQ6PF05 361 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 GPR142Q7Z601 462 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 SLC25A41Q8N5S1 370 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 C9orf72Q96LT7 481 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 CELF4Q9BZC1 486 aaKnown RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 TRAF3IP3Q9Y228 551 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PSMD3O43242 534 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 RAD51CO43502 376 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 URODP06132 367 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PPWD1Q96BP3 646 aaKnown RBP15.59■□□□□ 0.09
COL17A1-201ENST00000353479 FGD4Q96M96 766 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 TXLNGQ9NUQ3 528 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 EPS15L1Q9UBC2 864 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 DSEQ9UL01 958 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 MYPNQ86TC9 1320 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 TBKBP1A7MCY6 615 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 LHX1P48742 406 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 TWF1Q12792 350 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 IL31RAQ8NI17 732 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 HAS1Q92839 578 aa15.59■□□□□ 0.09
COL17A1-201ENST00000353479 PTPN11Q06124 597 aaPredicted RBP15.58■□□□□ 0.09
COL17A1-201ENST00000353479 DEFB115Q30KQ5 88 aa15.58■□□□□ 0.09
COL17A1-201ENST00000353479 ATP6V0D2Q8N8Y2 350 aa15.58■□□□□ 0.09
COL17A1-201ENST00000353479 FAM71DQ8N9W8 422 aa15.58■□□□□ 0.09
COL17A1-201ENST00000353479 USP38Q8NB14 1042 aa15.58■□□□□ 0.09
COL17A1-201ENST00000353479 PAK5Q9P286 719 aa15.58■□□□□ 0.09
COL17A1-201ENST00000353479 ALDH2P05091 517 aa15.58■□□□□ 0.08
COL17A1-201ENST00000353479 DNAJB2P25686 324 aa15.58■□□□□ 0.08
COL17A1-201ENST00000353479 KCNT1Q5JUK3 1230 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms