RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 SPA17Q15506 151 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 KCNT2Q6UVM3 1135 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 ACOT1Q86TX2 421 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 ACRBPQ8NEB7 543 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 KIAA1524Q8TCG1 905 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 TFAP2BQ92481 460 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 DNAI2Q9GZS0 605 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 DDX43Q9NXZ2 648 aaKnown RBP21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 KIAA1257Q9ULG3 409 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 ADGRG1Q9Y653 693 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZNF263O14978 683 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 IPO7O95373 1038 aaKnown RBP21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 LAG3P18627 525 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 CYP27A1Q02318 531 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 ELAVL2Q12926 359 aaKnown RBP21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 FUT10Q6P4F1 479 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 TMEM173Q86WV6 379 aaPredicted RBP21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 CRYBG2Q8N1P7 616 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 TNIP3Q96KP6 325 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZNF558Q96NG5 402 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 PCDHB18PQ96TA0 734 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 RAD9AQ99638 391 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZSWIM1Q9BR11 485 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 GPR62Q9BZJ7 368 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 DPEP3Q9H4B8 488 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 NAGPAQ9UK23 515 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 SF3B1O75533 1304 aaKnown RBP eCLIP21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 CARNS1A5YM72 827 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 SYN3O14994 580 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 MED7O43513 233 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 KRT83P78385 493 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 SGO2Q562F6 1265 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 C9orf50Q5SZB4 431 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 ALKBH5Q6P6C2 394 aaKnown RBP21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZSCAN30Q86W11 494 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 FIBCD1Q8N539 461 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 PDCL3Q9H2J4 239 aa21.4■■□□□ 1.02
SIGMAR1-202ENST00000353468 TLL1O43897 1013 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 CCDC175P0C221 793 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 TKTP29401 623 aaKnown RBP21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 YWHAHQ04917 246 aaPredicted RBP21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 CCDC122Q5T0U0 273 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 FAM171A1Q5VUB5 890 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 OVOS1Q6IE37 1185 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 C12orf29Q8N999 325 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 COLGALT1Q8NBJ5 622 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 BCL7CQ8WUZ0 217 aaPredicted RBP21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 IGSF21Q96ID5 467 aa21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 REXO2Q9Y3B8 237 aaKnown RBP21.39■■□□□ 1.01
SIGMAR1-202ENST00000353468 CFHP08603 1231 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 ACAT1P24752 427 aaKnown RBP21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 PCSK1P29120 753 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 SSTR3P32745 418 aaPredicted RBP21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 SHHQ15465 462 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 CNGA2Q16280 664 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 PALB2Q86YC2 1186 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 THEM5Q8N1Q8 247 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 AAASQ9NRG9 546 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 NENFQ9UMX5 172 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 PCDHGC3Q9UN70 934 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 PPP2R2CQ9Y2T4 447 aa21.38■■□□□ 1.01
SIGMAR1-202ENST00000353468 PTPN1P18031 435 aaKnown RBP21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 FGFR3P22607 806 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 MAGEA1P43355 309 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 TRIM72Q6ZMU5 477 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 SLC39A11Q8N1S5 342 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 B3GALNT2Q8NCR0 500 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 SP7Q8TDD2 431 aaPredicted RBP21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 RNPC3Q96LT9 517 aaKnown RBP21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 RTP3Q9BQQ7 232 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 ACBD6Q9BR61 282 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 CDH9Q9ULB4 789 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 PCDHA13Q9Y5I0 950 aa21.37■■□□□ 1.01
SIGMAR1-202ENST00000353468 O00370 1275 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 ATP2C2O75185 946 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 OAZ2O95190 189 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 EFEMP2O95967 443 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 CYP1A1P04798 512 aaPredicted RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 GZMAP12544 262 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 PSMC1P62191 440 aaKnown RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 STILQ15468 1287 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 C10orf76Q5T2E6 689 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 PPP1R26Q5T8A7 1209 aaPredicted RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 KIAA0319Q5VV43 1072 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 CEP57Q86XR8 500 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 CYFIP2Q96F07 1278 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 LPIN3Q9BQK8 851 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 SYT15Q9BQS2 421 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 TAS2R14Q9NYV8 317 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 SPG21Q9NZD8 308 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 TSC2P49815 1807 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 TMCO5BA8MYB1 307 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 ZSCAN12O43309 604 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 UNGP13051 313 aaPredicted RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 MSNP26038 577 aaKnown RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 CLEC16AQ2KHT3 1053 aa21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 VARS2Q5ST30 1063 aaKnown RBP21.36■■□□□ 1.01
SIGMAR1-202ENST00000353468 ARHGAP17Q68EM7 881 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms