RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ITPRIPL1Q6GPH6 555 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 ATPAF2Q8N5M1 289 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 CHMP6Q96FZ7 201 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 PAMP19021 973 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 NDST1P52848 882 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 EIF3BP55884 814 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 PTPN11Q06124 597 aaPredicted RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 TAF2Q6P1X5 1199 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 ANO5Q75V66 913 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 TRIM62Q9BVG3 475 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 COL20A1Q9P218 1284 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 B4GALT5O43286 388 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 RECQL4O94761 1208 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 ZFXP17010 805 aaPredicted RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 ACADSBP45954 432 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 MDM2Q00987 491 aaPredicted RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 BYSLQ13895 437 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 HIF1AQ16665 826 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 EFHC1Q5JVL4 640 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 HABP4Q5JVS0 413 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 EFHBQ8N7U6 833 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 DDX43Q9NXZ2 648 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 LSM7Q9UK45 103 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 SUN1O94901 812 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 ZNF677Q86XU0 584 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 REXO1L1PQ8IX06 675 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 NDUFAF2Q8N183 169 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 SYN2Q92777 582 aaPredicted RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 DNAJC19Q96DA6 116 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 ALG13Q9NP73 1137 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 CAPN7Q9Y6W3 813 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 RAD51CO43502 376 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 SPAG7O75391 227 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 MAP4K3Q8IVH8 894 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 FAM71DQ8N9W8 422 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 EDEM1Q92611 657 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 TMEM176AQ96HP8 235 aa14.38□□□□□ -0.11
SMC6-201ENST00000351948 CALR3Q96L12 384 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
SMC6-201ENST00000351948 CYP3A7-CYP3A51PA0A087WV96 503 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 E2F8A0AVK6 867 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 GJB6O95452 261 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CYBBP04839 570 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 SKIP12755 728 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CYP3A7P24462 503 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 PPP3CAQ08209 521 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 KRT33BQ14525 404 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 ANO4Q32M45 955 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 TAF1BQ53T94 588 aaPredicted RBP14.37□□□□□ -0.11
SMC6-201ENST00000351948 LBX2Q6XYB7 198 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 HACD3Q9P035 362 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 SH3BP1Q9Y3L3 701 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 FAM187AA6NFU0 413 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 KRT38O76015 456 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 ENDOD1O94919 500 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 VDRP11473 427 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 TMPRSS15P98073 1019 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 NT5DC1Q5TFE4 455 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 SH3RF1Q7Z6J0 888 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 KPNA6O60684 536 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CCNE2O96020 404 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 KITP10721 976 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 MCF2P10911 925 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CD302Q8IX05 232 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 SLC25A41Q8N5S1 370 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CCNYL1Q8N7R7 359 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CCDC197Q8NCU1 140 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 FBXO32Q969P5 355 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMC6-201ENST00000351948 TNFSF9P41273 254 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 CAPSQ13938 189 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
SMC6-201ENST00000351948 FAM133BQ5BKY9 247 aaKnown RBP14.37□□□□□ -0.11
SMC6-201ENST00000351948 ZNF449Q6P9G9 518 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 OR2W6PQ8NHA6 318 aa14.37□□□□□ -0.11
SMC6-201ENST00000351948 TMEM88BA6NKF7 163 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ATP8B1O43520 1251 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 PHF2O75151 1096 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 LRG1P02750 347 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 NCF2P19878 526 aaPredicted RBP14.36□□□□□ -0.11
SMC6-201ENST00000351948 SESN3P58005 492 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 TRIM67Q6ZTA4 783 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 GPATCH11Q8N954 259 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 LPPQ93052 612 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 KLRC4O43908 158 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ALDH2P05091 517 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 CKMP06732 381 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 MLH1P40692 756 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms