RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 CFAP57Q96MR6 1250 aa15.95■□□□□ 0.14
PTBP1-201ENST00000349038 SYT11Q9BT88 431 aa15.95■□□□□ 0.14
PTBP1-201ENST00000349038 PLVAPQ9BX97 442 aa15.95■□□□□ 0.14
PTBP1-201ENST00000349038 PCDHGA4Q9Y5G9 962 aa15.95■□□□□ 0.14
PTBP1-201ENST00000349038 CAPN8A6NHC0 703 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 PIK3R2O00459 728 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 XPO1O14980 1071 aaKnown RBP15.94■□□□□ 0.14
PTBP1-201ENST00000349038 ADCY3O60266 1144 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 HSPA6P17066 643 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 SLC44A4Q53GD3 710 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 SLC45A4Q5BKX6 768 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 FAM178BQ8IXR5 827 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 SEPT12Q8IYM1 358 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 RNF148Q8N7C7 305 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 SMC1BQ8NDV3 1235 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 PPP1R14CQ8TAE6 165 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 MBOAT7Q96N66 472 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 PANX3Q96QZ0 392 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 PRPF18Q99633 342 aaKnown RBP15.94■□□□□ 0.14
PTBP1-201ENST00000349038 TMEM109Q9BVC6 243 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 FAM192AQ9GZU8 254 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.94■□□□□ 0.14
PTBP1-201ENST00000349038 TP73O15350 636 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 ASLP04424 464 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 CCDC15Q0P6D6 951 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 NOP9Q86U38 636 aaKnown RBP15.94■□□□□ 0.14
PTBP1-201ENST00000349038 PI4K2AQ9BTU6 479 aa15.94■□□□□ 0.14
PTBP1-201ENST00000349038 TPD52L2O43399 206 aaKnown RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 NRLP54845 237 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 TMPRSS15P98073 1019 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 ZNF200P98182 395 aaPredicted RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 LSAMPQ13449 338 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 TNFAIP8L3Q5GJ75 292 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 DUS1LQ6P1R4 473 aaKnown RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 RSPH3Q86UC2 560 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 ARHGAP24Q8N264 748 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.93■□□□□ 0.145e-12■■□□□ 14.1
PTBP1-201ENST00000349038 SETDB2Q96T68 719 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 KANSL3Q9P2N6 904 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PCDHGB4Q9UN71 923 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PCDHGB5Q9Y5G0 923 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 CYP3A7-CYP3A51PA0A087WV96 503 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 LPXNO60711 386 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 EYA4O95677 639 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 CYP3A7P24462 503 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 SPIRE1Q08AE8 756 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 RALGPS1Q5JS13 557 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 C15orf52Q6ZUT6 534 aaKnown RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 TREML1Q86YW5 311 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 OR6Y1Q8NGX8 325 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PAIP2BQ9ULR5 123 aaKnown RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 COMMD3-BMI1R4GMX3 469 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 ZNF831Q5JPB2 1677 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 A0A0J9YVX5 310 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 C2CD2LO14523 706 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PSMD6Q15008 389 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PABPC1LQ4VXU2 614 aaKnown RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 LMBRD2Q68DH5 695 aaPredicted RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 DPP8Q6V1X1 898 aaPredicted RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PALM2Q8IXS6 379 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 OLFM3Q96PB7 478 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 OSBPL8Q9BZF1 889 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 PFDN4Q9NQP4 134 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 SLC7A8Q9UHI5 535 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 RBMX2Q9Y388 322 aaKnown RBP15.93■□□□□ 0.14
PTBP1-201ENST00000349038 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
PTBP1-201ENST00000349038 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 TGFB1I1O43294 461 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 AKR1B1P15121 316 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 GK3PQ14409 553 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 SH2D4BQ5SQS7 431 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 C3orf62Q6ZUJ4 267 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 RHPN2Q8IUC4 686 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 GDPD5Q8WTR4 605 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 DCUN1D5Q9BTE7 237 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 WHRNQ9P202 907 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 ZNF212Q9UDV6 495 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 UMODL1Q5DID0 1318 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 E5RJQ4 531 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 CLPTM1O96005 669 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 MT-ND3P03897 115 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 GABPAQ06546 454 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 ULK2Q8IYT8 1036 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 PYROXD1Q8WU10 500 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 FAM163AQ96GL9 167 aaPredicted RBP15.92■□□□□ 0.14
PTBP1-201ENST00000349038 TMEM121Q9BTD3 319 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 SRP68Q9UHB9 627 aaKnown RBP15.92■□□□□ 0.14
PTBP1-201ENST00000349038 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 SPATA31A1Q5TZJ5 1347 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 ADGRA3Q8IWK6 1321 aa15.92■□□□□ 0.14
PTBP1-201ENST00000349038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-201ENST00000349038 SPECC1L-ADORA2AF8WAN1 911 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 ZBTB5O15062 677 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 XPOTO43592 962 aaKnown RBP15.91■□□□□ 0.14
PTBP1-201ENST00000349038 EML3Q32P44 896 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 PPP1R2P3Q6NXS1 205 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 OXNAD1Q96HP4 312 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-201ENST00000349038 MRPL1Q9BYD6 325 aaKnown RBP15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms