RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CES4AQ5XG92 561 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 FAM47EQ6ZV65 393 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 UNC45BQ8IWX7 931 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 KATNAL2Q8IYT4 538 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 C4orf33Q8N1A6 199 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ZNF276Q8N554 614 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 C12orf42Q96LP6 360 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CGRRF1Q99675 332 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ACO2Q99798 780 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CCDC134Q9H6E4 229 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PLAC1Q9HBJ0 212 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PTPRHQ9HD43 1115 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 KCNK9Q9NPC2 374 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 RASAL2Q9UJF2 1139 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 SRRM3A6NNA2 597 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 GPR25O00155 361 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ADCY3O60266 1144 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ERBB2P04626 1255 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 BRAFP15056 766 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 TFE3P19532 575 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 TAC1P20366 129 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 RPA3P35244 121 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 SLC25A11Q02978 314 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 LAMTOR4Q0VGL1 99 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CCNG2Q16589 344 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 GKAP1Q5VSY0 366 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 MAMSTRQ6ZN01 415 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 TBC1D1Q86TI0 1168 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ECHDC2Q86YB7 292 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ARFGAP2Q8N6H7 521 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 MCPH1Q8NEM0 835 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PRR11Q96HE9 360 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 IWS1Q96ST2 819 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 RBM15Q96T37 977 aaKnown RBP eCLIP6.39□□□□□ -1.396e-7■■■□□ 17.5
CLCN3-201ENST00000347613 KLF6Q99612 283 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ZWILCHQ9H900 591 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 C17orf75Q9HAS0 396 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 KIAA1586Q9HCI6 787 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 GGA2Q9UJY4 613 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CTDP1Q9Y5B0 961 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 hCG_1818297A0A087WSY0 165 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 GOLGA6L7A0A1B0GV03 622 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 ATP2A1O14983 1001 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 LRCH4O75427 683 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 NFICP08651 508 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CXCL8P10145 99 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 MAGEA4P43358 317 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 NAMPTP43490 491 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CLCN3P51790 818 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 NCALDP61601 193 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 XRCC4Q13426 336 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 E2F5Q15329 346 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 NUGGCQ68CJ6 796 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CCDC121Q6ZUS5 278 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 ANKRD35Q8N283 1001 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 RNF149Q8NC42 400 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 DEPTORQ8TB45 409 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 MORC4Q8TE76 937 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 DENND1AQ8TEH3 1009 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 UPF1Q92900 1129 aaKnown RBP eCLIP6.38□□□□□ -1.395e-6■□□□□ 10.5
CLCN3-201ENST00000347613 IFT74Q96LB3 600 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 PGLYRP2Q96PD5 576 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 SMYD3Q9H7B4 428 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 GPBP1L1Q9HC44 474 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 NXF1Q9UBU9 619 aaKnown RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CPSF3Q9UKF6 684 aaKnown RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 MTUS1Q9ULD2 1270 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 MAFO75444 373 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 KIAA0754O94854 1291 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 TMEM63AO94886 807 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 KRT16P08779 473 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 ATF2P15336 505 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 EDNRBP24530 442 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 YY1P25490 414 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CDC25CP30307 473 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 GCLCP48506 637 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 ARSEP51690 589 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 STAT5BP51692 787 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 GPS1Q13098 491 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 SLMAPQ14BN4 828 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 STXBP2Q15833 593 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 RNASEH2BQ5TBB1 312 aaKnown RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 LBX2Q6XYB7 198 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 SPOCD1Q6ZMY3 1216 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 RHPN2Q8IUC4 686 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 FBXO16Q8IX29 292 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 RHOT1Q8IXI2 618 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 ALLCQ8N6M5 410 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 C12orf29Q8N999 325 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 RDM1Q8NG50 284 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CKAP2Q8WWK9 683 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 CPB2Q96IY4 423 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 SCLT1Q96NL6 688 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 EFCC1Q9HA90 598 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 SAYSD1Q9NPB0 183 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 KANSL3Q9P2N6 904 aa6.38□□□□□ -1.39
CLCN3-201ENST00000347613 MTRF1LQ9UGC7 380 aaKnown RBP6.38□□□□□ -1.39
CLCN3-201ENST00000347613 PCSK1NQ9UHG2 260 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms