RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM71AQ8IYT1 594 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 CCDC127Q96BQ5 260 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 RILPQ96NA2 401 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 VPS11Q9H270 941 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 CCDC195A0A1B0GUA6 201 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 MSH4O15457 936 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 SUPT3HO75486 399 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 ATP6V1B1P15313 513 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 VCLP18206 1134 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 PEX2P28328 305 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
LMNA-201ENST00000347559 SLC1A1P43005 524 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 MXI1P50539 228 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 ADARP55265 1226 aaKnown RBP16.12■□□□□ 0.17
LMNA-201ENST00000347559 BTKQ06187 659 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 PDK3Q15120 406 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 GRAMD1BQ3KR37 738 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 ATP13A4Q4VNC1 1196 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 STXBP4Q6ZWJ1 553 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 PYROXD1Q8WU10 500 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 CBWD1Q9BRT8 395 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 RTFDC1Q9BY42 306 aaPredicted RBP16.12■□□□□ 0.17
LMNA-201ENST00000347559 SLC24A2Q9UI40 661 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 SPDYE16A6NNV3 312 aaPredicted RBP16.12■□□□□ 0.17
LMNA-201ENST00000347559 BUD23O43709 281 aaKnown RBP16.12■□□□□ 0.17
LMNA-201ENST00000347559 MT-ND3P03897 115 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 UQCRBP14927 111 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 ADSSP30520 456 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 TAS2R40P59535 323 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 TRIP10Q15642 601 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 ACAD10Q6JQN1 1059 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 C3orf62Q6ZUJ4 267 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 PDSS2Q86YH6 399 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
LMNA-201ENST00000347559 ABCD1P33897 745 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 SERPINB6P35237 376 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 GPX6P59796 221 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 PPP4CP60510 307 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 DHDDSQ86SQ9 333 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 ARID3BQ8IVW6 561 aaPredicted RBP16.11■□□□□ 0.17
LMNA-201ENST00000347559 DGCR14Q96DF8 476 aaKnown RBP16.11■□□□□ 0.17
LMNA-201ENST00000347559 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 ZNF395Q9H8N7 513 aaPredicted RBP16.11■□□□□ 0.17
LMNA-201ENST00000347559 SMIM31A0A1B0GVY4 71 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 SLURP2P0DP57 97 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 RGS2P41220 211 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 COG7P83436 770 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 KLF1Q13351 362 aaPredicted RBP16.11■□□□□ 0.17
LMNA-201ENST00000347559 C1orf186Q6ZWK4 172 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 GDPD5Q8WTR4 605 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 GINM1Q9NU53 330 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 ZNF711Q9Y462 761 aa16.11■□□□□ 0.17
LMNA-201ENST00000347559 K7ENM7 598 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 CCDC166P0CW27 439 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 ZYXQ15942 572 aaKnown RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMNA-201ENST00000347559 BANPQ8N9N5 519 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 PRPF31Q8WWY3 499 aaKnown RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 GCNAQ96QF7 691 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 MECRQ9BV79 373 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 C10orf88Q9H8K7 445 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 TBC1D30Q9Y2I9 924 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 GMEB1Q9Y692 573 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 MFAP3P55082 362 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 SLC25A3Q00325 362 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 MSLNQ13421 630 aaPredicted RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 PRKD1Q15139 912 aaPredicted RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 KLC3Q6P597 504 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 B3GNT6Q6ZMB0 384 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 CATSPER2Q96P56 530 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 KLHL4Q9C0H6 718 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 S100A14Q9HCY8 104 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 RABGEF1Q9UJ41 708 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 SCN7AQ01118 1682 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 SGK1O00141 431 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 ALOX15BO15296 676 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 TM9SF1O15321 606 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 PDE5AO76074 875 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 SORBS2O94875 1100 aaKnown RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 PDE1BQ01064 536 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 SFSWAPQ12872 951 aaKnown RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 DUS1LQ6P1R4 473 aaKnown RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 RHPN2Q8IUC4 686 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 EFCAB3Q8N7B9 438 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 LENG9Q96B70 501 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 ACSF2Q96CM8 615 aaPredicted RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 ACAP3Q96P50 834 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 FIZ1Q96SL8 496 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 FOXP3Q9BZS1 431 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 GRIP2Q9C0E4 1043 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 PTTG2Q9NZH5 202 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 ADAMTS6Q9UKP5 1117 aa16.1■□□□□ 0.17
LMNA-201ENST00000347559 TDRKHQ9Y2W6 561 aaKnown RBP16.1■□□□□ 0.17
LMNA-201ENST00000347559 CYP3A7-CYP3A51PA0A087WV96 503 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms