RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 MAGI3Q5TCQ9 1506 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GNASQ5JWF2 1037 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 UBQLN1Q9UMX0 589 aaKnown RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 SOAT2O75908 522 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 SF3B3Q15393 1217 aaKnown RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 NAB2Q15742 525 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 CHMP1BQ7LBR1 199 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GOLPH3Q9H4A6 298 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 WEE2P0C1S8 567 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 CYTH1Q15438 398 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 METTL16Q86W50 562 aaKnown RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 UBA3Q8TBC4 463 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GPRASP2Q96D09 838 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GLT1D1Q96MS3 346 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 VPS33BQ9H267 617 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 NPHS2Q9NP85 383 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 MAN1C1Q9NR34 630 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 NMRK1Q9NWW6 199 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 VWA5AO00534 786 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 SLC9A1P19634 815 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GMPSP49915 693 aaPredicted RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 TRIM65Q6PJ69 517 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 SPATA18Q8TC71 538 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GPR182O15218 404 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 ALOX15P16050 662 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-201ENST00000346562 POLD3Q15054 466 aaPredicted RBP24.08■■□□□ 1.45
NPAS3-201ENST00000346562 LRRC71Q8N4P6 559 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 TRIM51Q9BSJ1 452 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 EVPLLA8MZ36 301 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 ANXA11P50995 505 aaKnown RBP24.08■■□□□ 1.45
NPAS3-201ENST00000346562 POU4F1Q01851 419 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 SGSM3Q96HU1 749 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 CHMP2BQ9UQN3 213 aa24.08■■□□□ 1.45
NPAS3-201ENST00000346562 HOXA2O43364 376 aa24.08■■□□□ 1.44
NPAS3-201ENST00000346562 SNRPAP09012 282 aaKnown RBP24.08■■□□□ 1.44
NPAS3-201ENST00000346562 GTF2H1P32780 548 aa24.08■■□□□ 1.44
NPAS3-201ENST00000346562 LONRF1Q17RB8 773 aa24.08■■□□□ 1.44
NPAS3-201ENST00000346562 SETD3Q86TU7 594 aaPredicted RBP24.08■■□□□ 1.44
NPAS3-201ENST00000346562 ATG9AQ7Z3C6 839 aa24.08■■□□□ 1.44
NPAS3-201ENST00000346562 HPS3Q969F9 1004 aa24.08■■□□□ 1.44
NPAS3-201ENST00000346562 EPB42P16452 691 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 PTGER2P43116 358 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 VPS72Q15906 364 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 C11orf96Q7Z7L8 435 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 TFB1MQ8WVM0 346 aaKnown RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 WWOXQ9NZC7 414 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 TULP4Q9NRJ4 1543 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 ZCCHC11Q5TAX3 1644 aaKnown RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 A0A1B0GW55 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 PGK2P07205 417 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4L2P0CJ85 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4L3P0CJ86 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4L4P0CJ87 422 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4L5P0CJ88 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4L6P0CJ89 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4L7P0CJ90 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 MUTP22033 750 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 GEMP55040 296 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 CYGBQ8WWM9 190 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 SH2D3AQ9BRG2 576 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DUX4Q9UBX2 424 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 GRID1Q9ULK0 1009 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 FDFT1P37268 417 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 SLC9A5Q14940 896 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 CCDC144BQ3MJ40 725 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 MARCH10Q8NA82 808 aaPredicted RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 TSEN34Q9BSV6 310 aaKnown RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 LRRC1Q9BTT6 524 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 MKNK1Q9BUB5 465 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 CACNA2D2Q9NY47 1150 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 IPPQ9Y573 584 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 C2orf81A6NN90 581 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 MYO1CO00159 1063 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 VCLP18206 1134 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 R3HDM1Q15032 1099 aaKnown RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 BTNL9Q6UXG8 535 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 GFM2Q969S9 779 aaKnown RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 ZNF512BQ96KM6 892 aaPredicted RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 DPP3Q9NY33 737 aa24.07■■□□□ 1.44
NPAS3-201ENST00000346562 ABI2Q9NYB9 513 aaPredicted RBP24.07■■□□□ 1.44
NPAS3-201ENST00000346562 A0A1B0GTH6 734 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 CHN1P15882 459 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 TCF7P36402 384 aaPredicted RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 EXOSC10Q01780 885 aaKnown RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 FAM47DPA6NHR8 397 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 UBE3AQ05086 875 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 RUNX1T1Q06455 604 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 CNTN1Q12860 1018 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 TERF2Q15554 542 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 TRIM69Q86WT6 500 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 ZNF513Q8N8E2 541 aaPredicted RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 YIPF3Q9GZM5 350 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 MTO1Q9Y2Z2 717 aaKnown RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 RIBC1Q8N443 379 aaPredicted RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 DDX28Q9NUL7 540 aaKnown RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 TRMT6Q9UJA5 497 aaKnown RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 CDY2AQ9Y6F7 541 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 CDY1Q9Y6F8 540 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 TRPC5OSA6NMA1 111 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms