RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 PCMTD2Q9NV79 361 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 GRAP2O75791 330 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 KRT16P08779 473 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 GCNT1Q02742 428 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 ACCSLQ4AC99 568 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPRU-201ENST00000345512 MTBPQ96DY7 904 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 WRNIP1Q96S55 665 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
PTPRU-201ENST00000345512 RABGAP1LQ5R372 815 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 GSDMBQ8TAX9 411 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 SH3GL3Q99963 347 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 NUF2Q9BZD4 464 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 ZFATQ9P243 1243 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 FBXO40Q9UH90 709 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 TLK1Q9UKI8 766 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 CSADQ9Y600 493 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 GH1P01241 217 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 PTPN4P29074 926 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 DBN1Q16643 649 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 NAIF1Q69YI7 327 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-201ENST00000345512 NIF3L1Q9GZT8 377 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 SLC24A2Q9UI40 661 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 FSCN2O14926 492 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 SNRPAP09012 282 aaKnown RBP16.29■□□□□ 0.2
PTPRU-201ENST00000345512 STX3Q13277 289 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 HIC1Q14526 733 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 FAXCQ5TGI0 409 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 RASSF3Q86WH2 238 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 DHX35Q9H5Z1 703 aaKnown RBP16.29■□□□□ 0.2
PTPRU-201ENST00000345512 AVENQ9NQS1 362 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-201ENST00000345512 STXBP5LQ9Y2K9 1186 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 LAMA4Q16363 1823 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 GPC4O75487 556 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 UNC5CO95185 931 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 HMGCS2P54868 508 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 SH2D4BQ5SQS7 431 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
PTPRU-201ENST00000345512 OR6B3Q8NGW1 331 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 SYTL5Q8TDW5 730 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-201ENST00000345512 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 SLCO1B3Q9NPD5 702 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 FIS1Q9Y3D6 152 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 AFF2P51816 1311 aa16.29■□□□□ 0.2
PTPRU-201ENST00000345512 NOL3O60936 208 aaKnown RBP16.28■□□□□ 0.2
PTPRU-201ENST00000345512 HOXA10P31260 410 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-201ENST00000345512 STAT5BP51692 787 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 MAP3K6O95382 1288 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 PRKCBP05771 671 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 PAEPP09466 180 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 CAP2P40123 477 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 HSP90AA5PQ58FG0 334 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 EXOC8Q8IYI6 725 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 NDUFAF2Q8N183 169 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 AGR3Q8TD06 166 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 E2F7Q96AV8 911 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 WDR35Q9P2L0 1181 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 MCM8Q9UJA3 840 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 UBTFL6P0CB48 400 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-201ENST00000345512 MYL2P10916 166 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 TYK2P29597 1187 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
PTPRU-201ENST00000345512 MCL1Q07820 350 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 KCTD2Q14681 263 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 CEP120Q8N960 986 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 TCP10LQ8TDR4 215 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 LRGUKQ96M69 825 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 METTL5Q9NRN9 209 aaKnown RBP16.28■□□□□ 0.2
PTPRU-201ENST00000345512 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
PTPRU-201ENST00000345512 CASQ2O14958 399 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 RPA3P35244 121 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 EFNA5P52803 228 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 SESN2P58004 480 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ACTR2P61160 394 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 BIRC2Q13490 618 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ART3Q13508 389 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 SLC15A2Q16348 729 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ATP13A4Q4VNC1 1196 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 CDR2LQ86X02 465 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ZCCHC9Q8N567 271 aaKnown RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 NLRP7Q8WX94 980 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 A1CFQ9NQ94 594 aaKnown RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 MYH6P13533 1939 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 PARP4Q9UKK3 1724 aaKnown RBP16.27■□□□□ 0.2
PTPRU-201ENST00000345512 RPTORQ8N122 1335 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 APOL1O14791 398 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 CRCPO75575 148 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 FDX1P10109 184 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ETS1P14921 441 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 CREB1P16220 341 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ADRA1DP25100 572 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 RGS7P49802 495 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 CHI3L2Q15782 390 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 LRRC6Q86X45 466 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 ZNF606Q8WXB4 792 aa16.27■□□□□ 0.2
PTPRU-201ENST00000345512 GRHL1Q9NZI5 618 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms