RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 C6orf203Q9P0P8 240 aaPredicted RBP14.2□□□□□ -0.14
TRIO-202ENST00000344204 CFBP00751 764 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 B3GALT6Q96L58 329 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 FAM8A1Q9UBU6 413 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 SLC9A2Q9UBY0 812 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 TRIM49D1C9J1S8 452 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 ZNF846Q147U1 533 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 CDKAL1Q5VV42 579 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 TAF2Q6P1X5 1199 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 AGPAT1Q99943 283 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
TRIO-202ENST00000344204 PCIF1Q9H4Z3 704 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 ZNF23P17027 643 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 KCNA1Q09470 495 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 RYBPQ8N488 228 aaPredicted RBP14.2□□□□□ -0.14
TRIO-202ENST00000344204 SCFD1Q8WVM8 642 aa14.2□□□□□ -0.14
TRIO-202ENST00000344204 CDV3Q9UKY7 258 aaKnown RBP14.2□□□□□ -0.14
TRIO-202ENST00000344204 PGM3O95394 542 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 PRLP01236 227 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 POLR2MP0CAP2 368 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 PFKFB3Q16875 520 aaPredicted RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 ARHGEF19Q8IW93 802 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 DDX3XO00571 662 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRIO-202ENST00000344204 IREB2P48200 963 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 PERM1Q5SV97 790 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 MAPKAPK5Q8IW41 473 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 EXOSC4Q9NPD3 245 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 RBMX2Q9Y388 322 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 HEY1Q9Y5J3 304 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 EIF2AK2P19525 551 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 PEX5LQ8IYB4 626 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 ASAP3Q8TDY4 903 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 TUBGCP5Q96RT8 1024 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 ADPGKQ9BRR6 497 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 IL1RL2Q9HB29 575 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 AATKQ6ZMQ8 1374 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 C15orf38-AP3S2A0A0A6YYH1 394 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 ZSCAN5CA6NGD5 496 aaPredicted RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 A8MUI8 341 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 SNX3O60493 162 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 RAD23AP54725 363 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 ARPINQ7Z6K5 226 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 RSPH1Q8WYR4 309 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 OLFM1Q99784 485 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 PUS7LQ9H0K6 701 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 SLC4A1P02730 911 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 SARSP49591 514 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 KRT73Q86Y46 540 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 KLRC1P26715 233 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 LCORLQ8N3X6 602 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 FAM162AQ96A26 154 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 MKNK1Q9BUB5 465 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 RTCBQ9Y3I0 505 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 ASCC3Q8N3C0 2202 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 SEMA3DO95025 777 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 NFKBIAP25963 317 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 NARS2Q96I59 477 aaKnown RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.19□□□□□ -0.14
TRIO-202ENST00000344204 COQ6Q9Y2Z9 468 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 MYO1GB0I1T2 1018 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 PDE9AO76083 593 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 ANPEPP15144 967 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.19□□□□□ -0.144e-7■■■■■ 63.3
TRIO-202ENST00000344204 EPAS1Q99814 870 aa14.19□□□□□ -0.14
TRIO-202ENST00000344204 MGRN1O60291 552 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 COMTP21964 271 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 STX5Q13190 355 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 TXNRD1Q16881 649 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 ATG14Q6ZNE5 492 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 FNIP1Q8TF40 1166 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 CCSER1Q9C0I3 900 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 EFCAB1Q9HAE3 211 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 RNF103O00237 685 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 GNPATO15228 680 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 ASMTLO95671 621 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 RAB15P59190 212 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 FOLH1Q04609 750 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 SYTL1Q8IYJ3 562 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 KCNJ1P48048 391 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 ERVK-9P63128 1117 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 TJAP1Q5JTD0 557 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 NLRP10Q86W26 655 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 OSBPL6Q9BZF3 934 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 GGA1Q9UJY5 639 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 AKR1D1P51857 326 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 TAP1Q03518 808 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 MAPK6Q16659 721 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 RASSF5Q8WWW0 418 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 ZSWIM1Q9BR11 485 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 ZNF609O15014 1411 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 UCHL3P15374 230 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 SNX17Q15036 470 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 CNGA2Q16280 664 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 SPATA2Q9UM82 520 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 V9GYQ6 96 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms