RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 REXO2Q9Y3B8 237 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 PYGMP11217 842 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 IL1RL1Q01638 556 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MCL1Q07820 350 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 BNIP1Q12981 228 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 STX5Q13190 355 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 GPR141Q7Z602 305 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 BAP1Q92560 729 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 OXNAD1Q96HP4 312 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 CCT7Q99832 543 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ASCC2Q9H1I8 757 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 BTBD7Q9P203 1132 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 BAZ2AQ9UIF9 1905 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 AKAP3O75969 853 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 FAM58BPP0C7Q3 252 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CASP4P49662 377 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 PHACTR1Q9C0D0 580 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 TIMMDC1Q9NPL8 285 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 HACD3Q9P035 362 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SCHIP1Q9P0W5 487 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 FAM205AQ6ZU69 1335 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MST1RQ04912 1400 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 EXTL3O43909 919 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 RASA1P20936 1047 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 PPP4CP60510 307 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF268Q14587 947 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 FAM102AQ5T9C2 384 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 DCAF15Q66K64 600 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 C2orf40Q9H1Z8 148 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 TCP10L2B9ZVM9 353 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 PSMG1O95456 288 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SDC4P31431 198 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SLC12A3P55017 1021 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 TNFAIP2Q03169 654 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MKRN4PQ13434 485 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 SH3TC2Q8TF17 1288 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MAGEB5Q9BZ81 275 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF518BQ9C0D4 1074 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 RIOX1Q9H6W3 641 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SHOC2Q9UQ13 582 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 FAM196BA6NMK8 535 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 TNPO2O14787 897 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 SH3BP5O60239 455 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CYP11B1P15538 503 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 NUDT2P50583 147 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ITKQ08881 620 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 KRR1Q13601 381 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 IL17AQ16552 155 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 FBXO33Q7Z6M2 555 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 EXOC3L1Q86VI1 746 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ATP8B4Q8TF62 1192 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 C8orf37Q96NL8 207 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ANGPT2O15123 496 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PDE5AO76074 875 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PTK6Q13882 451 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TMEM119Q4V9L6 283 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SLC27A3Q5K4L6 730 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ITPRIPL1Q6GPH6 555 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 STN1Q9H668 368 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MAP3K20Q9NYL2 800 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ATP8B3O60423 1300 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 OPLAHO14841 1288 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TOMM70O94826 608 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 RPA3P35244 121 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SPRP35270 261 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PPARGP37231 505 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SERPINB8P50452 374 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TTC33Q6PID6 262 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SLC26A11Q86WA9 606 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TMCO5AQ8N6Q1 288 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PGBD4Q96DM1 585 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PAFAH2Q99487 392 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 RIT2Q99578 217 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ILKAPQ9H0C8 392 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PCDH9Q9HC56 1237 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 DTNAQ9Y4J8 743 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 NCKAP1LP55160 1127 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KCNJ2P63252 427 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SGSM1Q2NKQ1 1148 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PDPK2PQ6A1A2 396 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PIGWQ7Z7B1 504 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 C7orf31Q8N865 590 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KLHL23Q8NBE8 558 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ROBO3Q96MS0 1386 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 RMDN3Q96TC7 470 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 NAT9Q9BTE0 207 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 LRRC4BQ9NT99 713 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MARCOQ9UEW3 520 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MAGED2Q9UNF1 606 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SMIM31A0A1B0GVY4 71 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KANSL1LA0AUZ9 987 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 DGAT1O75907 488 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 RBP3P10745 1247 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ATP6V1B1P15313 513 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 AUHQ13825 339 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KYAT1Q16773 422 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ZBTB33Q86T24 672 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MCUQ8NE86 351 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TNIP2Q8NFZ5 429 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KAT2BQ92831 832 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms