RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 ATP6V0D2Q8N8Y2 350 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 CLMNQ96JQ2 1002 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 PPP1R12CQ9BZL4 782 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 TPX2Q9ULW0 747 aaKnown RBP20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 NVLO15381 856 aaKnown RBP20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 FGFR4P22455 802 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 TYK2P29597 1187 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 BEX3Q00994 111 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 PTGISQ16647 500 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 GPATCH11Q8N954 259 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 NLGN2Q8NFZ4 835 aa20.52■□□□□ 0.88
SEMA6C-201ENST00000341697 URODP06132 367 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 RBP3P10745 1247 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 BRAFP15056 766 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 RAP1GAPP47736 663 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 GTF2A1P52655 376 aaPredicted RBP20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 HAS1Q92839 578 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 WNK4Q96J92 1243 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 INTS13Q9NVM9 706 aa20.52■□□□□ 0.87
SEMA6C-201ENST00000341697 NFASCO94856 1347 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 MTSS1O43312 755 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 ALDH2P05091 517 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 RPL10AP62906 217 aaKnown RBP20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 CENPCQ03188 943 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 PTPN11Q06124 597 aaPredicted RBP20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 MAP2K5Q13163 448 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 MAP4K3Q8IVH8 894 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 TRIM55Q9BYV6 548 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 WDCPQ9H6R7 721 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 TRPV2Q9Y5S1 764 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 TMTC4Q5T4D3 741 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 ZNF280DQ6N043 979 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 PORCNQ9H237 461 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 EGFRP00533 1210 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 ANKMY2Q8IV38 441 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 CYTH2Q99418 400 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 FUCA2Q9BTY2 467 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 CASTOR2A6NHX0 329 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 MSCO60682 206 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 CABYRO75952 493 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 LSM8O95777 96 aaKnown RBP20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 OCRLQ01968 901 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 SP3Q02447 781 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 E2F4Q16254 413 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 HACD3Q9P035 362 aa20.51■□□□□ 0.87
SEMA6C-201ENST00000341697 RBM15Q96T37 977 aaKnown RBP eCLIP20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 CARD9Q9H257 536 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 GOLPH3Q9H4A6 298 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 RBM12Q9NTZ6 932 aaKnown RBP20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 F9P00740 461 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 EPHB2P29323 1055 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 C1orf186Q6ZWK4 172 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 RNF208Q9H0X6 261 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 SMAD1Q15797 465 aaKnown RBP20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 NFE2Q16621 373 aaPredicted RBP20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 CDC26Q8NHZ8 85 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 HASPINQ8TF76 798 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 COPS5Q92905 334 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 FBXO32Q969P5 355 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 PSTPIP1O43586 416 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 LAMB3Q13751 1172 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 CCDC38Q502W7 563 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 BRSK2Q8IWQ3 736 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 FAM96AQ9H5X1 160 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 NDFIP2Q9NV92 336 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 NRCAMQ92823 1304 aa20.5■□□□□ 0.87
SEMA6C-201ENST00000341697 MAPK13O15264 365 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 FBXO21O94952 628 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 HSPA8P11142 646 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 RAG1P15918 1043 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 AKAP5P24588 427 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 SLC11A2P49281 568 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 DGKZQ13574 1117 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 COG1Q8WTW3 980 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 PURBQ96QR8 312 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 TXLNGQ9NUQ3 528 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 LIG3P49916 1009 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 VSNL1P62760 191 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 SYCP2LQ5T4T6 812 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 NT5DC4Q86YG4 428 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 USP38Q8NB14 1042 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 SDCCAG3Q96C92 435 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 EPS15L1Q9UBC2 864 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 XPO7Q9UIA9 1087 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 SMAPO00193 183 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 POMCP01189 267 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 JAMLQ86YT9 394 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 CCNYL1Q8N7R7 359 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 ZSWIM1Q9BR11 485 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 KRT82Q9NSB4 513 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 NEU2Q9Y3R4 380 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 PPP2R2AP63151 447 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 TREML2Q5T2D2 321 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 MTHFD1LQ6UB35 978 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 CNPY4Q8N129 248 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 FOXP3Q9BZS1 431 aa20.49■□□□□ 0.87
SEMA6C-201ENST00000341697 SPDYE5A6NIY4 337 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 ZWINTO95229 277 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms