RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 HIST2H2AA3Q6FI13 130 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 CCNI2Q6ZMN8 369 aaPredicted RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 DDX53Q86TM3 631 aaKnown RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 WDR49Q8IV35 697 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 PCYOX1LQ8NBM8 494 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 SPATA4Q8NEY3 305 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ATP8B4Q8TF62 1192 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 SPIRE2Q8WWL2 714 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 DACT3Q96B18 629 aaPredicted RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ATP6V1G3Q96LB4 118 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 OSBPL8Q9BZF1 889 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 UBXN6Q9BZV1 441 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 MUC3BQ9H195 1237 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ASB7Q9H672 318 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 RIOX1Q9H6W3 641 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 PKD2L2Q9NZM6 624 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 TRPM5Q9NZQ8 1165 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 PSMC3IPQ9P2W1 217 aaPredicted RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ZFP69BQ9UJL9 534 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 FIS1Q9Y3D6 152 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 FAM208AQ9UK61 1670 aaKnown RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 KCNN4O15554 427 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 CTSHP09668 335 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 AKR1A1P14550 325 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 HOXB8P17481 243 aaPredicted RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 IL10P22301 178 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 HSPA9P38646 679 aaKnown RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ACOT2P49753 483 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ZNF177Q13360 481 aaPredicted RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 CUL2Q13617 745 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 IL31Q6EBC2 164 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 ANO5Q75V66 913 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 CNPY3Q9BT09 278 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 GOLPH3Q9H4A6 298 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 GJB4Q9NTQ9 266 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 NOP53Q9NZM5 478 aaKnown RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 SPACA6W5XKT8 324 aa8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 CHD2O14647 1828 aaKnown RBP8.06□□□□□ -1.12
ATP2B4-201ENST00000341360 HNRNPCL2B2RXH8 293 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 TRIM66O15016 1216 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 EIF3HO15372 352 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 TLR2O60603 784 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 AKT1P31749 480 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 DSG3P32926 999 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ANTXR2P58335 489 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 INPP5AQ14642 412 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 MTF1Q14872 753 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 PTPN21Q16825 1174 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 NBPF20Q3BBV1 942 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 DNAL1Q4LDG9 190 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 MRNIPQ6NTE8 343 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ZPBP2Q6X784 338 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ANKS1AQ92625 1134 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SRPK1Q96SB4 655 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 NEUROG2Q9H2A3 272 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 AGPAT3Q9NRZ7 376 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ITGA11Q9UKX5 1188 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 PCDHB12Q9Y5F1 795 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 GMNCA6NCL1 334 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 CFLARO15519 480 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ASMTLO95671 621 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 AASDHQ4L235 1098 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ACBD5Q5T8D3 534 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 AGBL2Q5U5Z8 902 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 COL23A1Q86Y22 540 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 MMGT1Q8N4V1 131 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SLC20A1Q8WUM9 679 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 PTPRN2Q92932 1015 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 TBCBQ99426 244 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SEPT5Q99719 369 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 TRPC7Q9HCX4 862 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 DPP3Q9NY33 737 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ZC3H7BQ9UGR2 993 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 MAD2L2Q9UI95 211 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 NAGPAQ9UK23 515 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 DRG1Q9Y295 367 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 LOC102724159A0A0B4J2E5 919 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 MSH4O15457 936 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SNRPAP09012 282 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SARSP49591 514 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 RENBPP51606 427 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SESN3P58005 492 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 AP2B1P63010 937 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ITGA9Q13797 1035 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 KRT72Q14CN4 511 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 PWP2Q15269 919 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 HP1BP3Q5SSJ5 553 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 KLHDC7AQ5VTJ3 777 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 UNC45BQ8IWX7 931 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 RNF217Q8TC41 542 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 TAAR1Q96RJ0 339 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 RTFDC1Q9BY42 306 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SPATC1LQ9H0A9 340 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 DDX47Q9H0S4 455 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 FBXO44Q9H4M3 255 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 ANKZF1Q9H8Y5 726 aa8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 SARS2Q9NP81 518 aaKnown RBP8.05□□□□□ -1.12
ATP2B4-201ENST00000341360 UXTQ9UBK9 157 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms