RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 MAATS1Q7Z4T9 603 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 NT5DC4Q86YG4 428 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 MCOLN2Q8IZK6 566 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 CRIPAKQ8N1N5 446 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 ZSWIM1Q9BR11 485 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 TSPYL2Q9H2G4 693 aaPredicted RBP16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 MRPL47Q9HD33 250 aaKnown RBP16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 SCINQ9Y6U3 715 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 LTBP2Q14767 1821 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 TMEM110-MUSTN1A8MSY1 372 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 C9IYK1 514 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 SPOPO43791 374 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 LSM8O95777 96 aaKnown RBP16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 P4HA1P13674 534 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 ATICP31939 592 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 SLC1A1P43005 524 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 ZNF132P52740 706 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 RNASE9P60153 205 aaKnown RBP16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 MYL6P60660 151 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 FAM193AP78312 1265 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 FAM189BP81408 668 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 DCAF4L1Q3SXM0 396 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 TWF2Q6IBS0 349 aaKnown RBP16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 CD302Q8IX05 232 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 TMEM199Q8N511 208 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 UBR7Q8N806 425 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 SEPT8Q92599 483 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 GDF3Q9NR23 364 aa16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 DMGDHQ9UI17 866 aaKnown RBP16.14■□□□□ 0.17
TUBB4B-201ENST00000340384 A0A0U1RQF3 1178 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 STAG3L1P0CL83 205 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 COMTP21964 271 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 RGS19P49795 217 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 OSTNP61366 133 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 PTPROQ16827 1216 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 NAA35Q5VZE5 725 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 MRPL10Q7Z7H8 261 aaKnown RBP16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 ZNF598Q86UK7 904 aaKnown RBP16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 PHF13Q86YI8 300 aaPredicted RBP16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 KLHL7Q8IXQ5 586 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 AENQ8WTP8 325 aaKnown RBP16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 FAM84AQ96KN4 292 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 ZNF518BQ9C0D4 1074 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 FAM124BQ9H5Z6 455 aaPredicted RBP16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 FAM105AQ9NUU6 356 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 SNTG2Q9NY99 539 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 IPPQ9Y573 584 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 CEP83Q9Y592 693 aa16.13■□□□□ 0.17
TUBB4B-201ENST00000340384 ZNF623O75123 536 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CST3P01034 146 aaPredicted RBP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 FGGP02679 453 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CXCL8P10145 99 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CTNNA1P35221 906 aaKnown RBP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 NOMO3P69849 1222 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 SLC7A5Q01650 507 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CUL1Q13616 776 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ZNF667Q5HYK9 610 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CNKSR3Q6P9H4 555 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 EFCAB13Q8IY85 973 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 TTC39CQ8N584 583 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 APBB2Q92870 758 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 UBXN6Q9BZV1 441 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 MED4Q9NPJ6 270 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ADAM22Q9P0K1 906 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 PRKAG2Q9UGJ0 569 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 MED7O43513 233 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ZMYND10O75800 440 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CALB1P05937 261 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 AKAP5P24588 427 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 GRM5P41594 1212 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 AFF1P51825 1210 aaKnown RBP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 GUCY2DQ02846 1103 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 SLC10A6Q3KNW5 377 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 AGMOQ6ZNB7 445 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 MON1BQ7L1V2 547 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 LPPQ93052 612 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CAVIN3Q969G5 261 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 RUNDC3BQ96NL0 473 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 FTHL17Q9BXU8 183 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 CISHQ9NSE2 258 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 RNF19AQ9NV58 838 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 MTUS1Q9ULD2 1270 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 PCDHA3Q9Y5H8 950 aa16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
TUBB4B-201ENST00000340384 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms